G1457051


Basic Information

Item Value
gene id G1457051
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 47976934 ~ 47977139 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1666953
atttattcctgtgttctcggtttgtctgttgccaatttgtcttgtcttgtcaagcttaccagcgtgATTTTCCAAGCTCCTGTTTTTTCCTAGTCTCTGTTTTTTCTAGTGCTCCCGGTTCTGACCTCTTGCCTGCCCTGACACTAAGCCCGCCTGTCTGActattcagcctgccctgacctcgagcctgcctgccgccctgcacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1666953 True 206 lncRNA 0.51 1 47976934 47977139

Neighbor

gene id symbol gene type direction distance location
LOC110493995 LOC106565194 coding upstream 5790 47938946 ~ 47971144 (+)
LOC118940470 NA coding upstream 143654 47828715 ~ 47833280 (+)
LOC100136222 LOC100136222 coding upstream 158347 47814891 ~ 47818587 (+)
LOC100135862 LOC106565314 coding upstream 169416 47805358 ~ 47807518 (+)
LOC110493993 LOC106565195 coding upstream 186921 47744356 ~ 47790013 (+)
LOC110493996 LOC106565313 coding downstream 3842 47980981 ~ 47985604 (+)
LOC110493997 LOC106565193 coding downstream 24131 48001270 ~ 48026662 (+)
glrx LOC106565191 coding downstream 53753 48030892 ~ 48036585 (+)
ubap1 LOC106565187 coding downstream 126398 48103537 ~ 48147244 (+)
dcaf12 LOC106565186 coding downstream 175843 48152982 ~ 48179263 (+)
G1456920 NA non-coding upstream 248899 47727795 ~ 47728035 (+)
G1456883 LOC106565198 non-coding upstream 262187 47713943 ~ 47714747 (+)
G1456888 NA non-coding upstream 267168 47707696 ~ 47709766 (+)
G1456889 NA non-coding upstream 271009 47704632 ~ 47705925 (+)
G1456916 NA non-coding upstream 275360 47701339 ~ 47701574 (+)
G1457091 NA non-coding downstream 99227 48076366 ~ 48076682 (+)
G1457093 NA non-coding downstream 110466 48087605 ~ 48087822 (+)
G1457137 NA non-coding downstream 222902 48200041 ~ 48200356 (+)
G1457153 NA non-coding downstream 288825 48265964 ~ 48266185 (+)
G1457154 NA non-coding downstream 289407 48266546 ~ 48266927 (+)
G1456969 NA other upstream 137564 47833580 ~ 47839370 (+)
G1456570 NA other upstream 748138 47228219 ~ 47228796 (+)
G1454824 NA other upstream 2118433 45856249 ~ 45858501 (+)
G1454127 NA other upstream 2640411 45335294 ~ 45336523 (+)
LOC110494013 LOC106565177 other downstream 411943 48389082 ~ 48424478 (+)
bsnb LOC106565168 other downstream 716182 48693321 ~ 48814670 (+)
erc2 LOC106583361 other downstream 945668 48866589 ~ 49040356 (+)
G1458807 NA other downstream 1461867 49439006 ~ 49439329 (+)

Expression


Co-expression Network