Gene
RNA
| Item | Value |
|---|---|
| gene id | G1457153 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 48265964 ~ 48266185 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1667066 | True | 222 | lncRNA | 0.37 | 1 | 48265964 | 48266185 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ubap2a | LOC106565184 | coding | upstream | 30773 | 48194992 ~ 48235191 (+) |
| dcaf12 | LOC106565186 | coding | upstream | 86701 | 48152982 ~ 48179263 (+) |
| ubap1 | LOC106565187 | coding | upstream | 118720 | 48103537 ~ 48147244 (+) |
| glrx | LOC106565191 | coding | upstream | 229379 | 48030892 ~ 48036585 (+) |
| LOC110493997 | LOC106565193 | coding | upstream | 239302 | 48001270 ~ 48026662 (+) |
| LOC110494009 | LOC106565181 | coding | downstream | 41640 | 48307825 ~ 48329446 (+) |
| tpgs2 | tpgs2 | coding | downstream | 82780 | 48348965 ~ 48354058 (+) |
| LOC110494013 | LOC106565177 | coding | downstream | 122908 | 48389082 ~ 48424478 (+) |
| LOC110494016 | LOC106565178 | coding | downstream | 243692 | 48509877 ~ 48515292 (+) |
| LOC110494018 | LOC106565175 | coding | downstream | 313125 | 48579310 ~ 48583667 (+) |
| G1457137 | NA | non-coding | upstream | 65608 | 48200041 ~ 48200356 (+) |
| G1457093 | NA | non-coding | upstream | 178142 | 48087605 ~ 48087822 (+) |
| G1457091 | NA | non-coding | upstream | 189282 | 48076366 ~ 48076682 (+) |
| G1457051 | NA | non-coding | upstream | 288825 | 47976934 ~ 47977139 (+) |
| G1456920 | NA | non-coding | upstream | 537929 | 47727795 ~ 47728035 (+) |
| G1457154 | NA | non-coding | downstream | 361 | 48266546 ~ 48266927 (+) |
| G1457155 | NA | non-coding | downstream | 1235 | 48267420 ~ 48267733 (+) |
| G1457156 | NA | non-coding | downstream | 1691 | 48267876 ~ 48268092 (+) |
| G1457157 | NA | non-coding | downstream | 2437 | 48268622 ~ 48268881 (+) |
| G1457158 | NA | non-coding | downstream | 3188 | 48269373 ~ 48270046 (+) |
| G1456969 | NA | other | upstream | 426594 | 47833580 ~ 47839370 (+) |
| LOC100135862 | LOC106565314 | other | upstream | 458483 | 47805358 ~ 47807518 (+) |
| G1456570 | NA | other | upstream | 1037168 | 47228219 ~ 47228796 (+) |
| G1454824 | NA | other | upstream | 2407463 | 45856249 ~ 45858501 (+) |
| bsnb | LOC106565168 | other | downstream | 427136 | 48693321 ~ 48814670 (+) |
| erc2 | LOC106583361 | other | downstream | 656622 | 48866589 ~ 49040356 (+) |
| G1458807 | NA | other | downstream | 1172821 | 49439006 ~ 49439329 (+) |
| LOC110494957 | qrich1 | other | downstream | 1914980 | 50181045 ~ 50192699 (+) |
