G1457154


Basic Information

Item Value
gene id G1457154
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 48266546 ~ 48266927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1667067
ATTTTTTTGACTTGTAAAATAGGGACATAATTGGAAAATGCCATGGATACCCCCACTCTCAACTTAAACTGGTGACTGAACTAAGATTTGTTTAAGGCAATGGTATTGCTGTTGTGATTAATTGTGTCGTTTTGGGTACTGGTAGTTAGGAGTACGGCAAACACCTTATTTATTTTCTAGGAGACAAACTGTGAGGCAGTGAGGGTGGTGAAAGGGAAAGAGCCAAGGAGAGAGACTTCAGAGGACAGTgtcacagccacggcaggaccaggtgtcaaccttgttgccagcagcaccagtataggggacagtgtcacagccacggcaggaccaggtgtcaaccttgttgtcagcagcaccagtataggggacagtgtcacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1667067 True 382 lncRNA 0.47 1 48266546 48266927

Neighbor

gene id symbol gene type direction distance location
ubap2a LOC106565184 coding upstream 31355 48194992 ~ 48235191 (+)
dcaf12 LOC106565186 coding upstream 87283 48152982 ~ 48179263 (+)
ubap1 LOC106565187 coding upstream 119302 48103537 ~ 48147244 (+)
glrx LOC106565191 coding upstream 229961 48030892 ~ 48036585 (+)
LOC110493997 LOC106565193 coding upstream 239884 48001270 ~ 48026662 (+)
LOC110494009 LOC106565181 coding downstream 40898 48307825 ~ 48329446 (+)
tpgs2 tpgs2 coding downstream 82038 48348965 ~ 48354058 (+)
LOC110494013 LOC106565177 coding downstream 122166 48389082 ~ 48424478 (+)
LOC110494016 LOC106565178 coding downstream 242950 48509877 ~ 48515292 (+)
LOC110494018 LOC106565175 coding downstream 312383 48579310 ~ 48583667 (+)
G1457153 NA non-coding upstream 361 48265964 ~ 48266185 (+)
G1457137 NA non-coding upstream 66190 48200041 ~ 48200356 (+)
G1457093 NA non-coding upstream 178724 48087605 ~ 48087822 (+)
G1457091 NA non-coding upstream 189864 48076366 ~ 48076682 (+)
G1457051 NA non-coding upstream 289407 47976934 ~ 47977139 (+)
G1457155 NA non-coding downstream 493 48267420 ~ 48267733 (+)
G1457156 NA non-coding downstream 949 48267876 ~ 48268092 (+)
G1457157 NA non-coding downstream 1695 48268622 ~ 48268881 (+)
G1457158 NA non-coding downstream 2446 48269373 ~ 48270046 (+)
G1457210 NA non-coding downstream 108024 48374951 ~ 48375172 (+)
G1456969 NA other upstream 427176 47833580 ~ 47839370 (+)
LOC100135862 LOC106565314 other upstream 459065 47805358 ~ 47807518 (+)
G1456570 NA other upstream 1037750 47228219 ~ 47228796 (+)
G1454824 NA other upstream 2408045 45856249 ~ 45858501 (+)
bsnb LOC106565168 other downstream 426394 48693321 ~ 48814670 (+)
erc2 LOC106583361 other downstream 655880 48866589 ~ 49040356 (+)
G1458807 NA other downstream 1172079 49439006 ~ 49439329 (+)
LOC110494957 qrich1 other downstream 1914238 50181045 ~ 50192699 (+)

Expression


Co-expression Network