G1457156


Basic Information

Item Value
gene id G1457156
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 48267876 ~ 48268092 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1667069
AGAGGTCCTCAGGAGGCTTCCAGTGGAGGTGCGGGGGTTGGTTGACCAAGTTAAGGTGCTGATCAGAATTGTCTGTAATGTACATAAAGACAGGCTGGACAGTCTTGAGGGAGAATATCTGCCAGCAATTTGTTGGATCCATTGAAACCCTCAAACATAGGTTCGGTTCTTTTGTTCAGTAGTGTGtatagcagtggttctcaaccttttTTAGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1667069 True 217 lncRNA 0.45 1 48267876 48268092

Neighbor

gene id symbol gene type direction distance location
ubap2a LOC106565184 coding upstream 32685 48194992 ~ 48235191 (+)
dcaf12 LOC106565186 coding upstream 88613 48152982 ~ 48179263 (+)
ubap1 LOC106565187 coding upstream 120632 48103537 ~ 48147244 (+)
glrx LOC106565191 coding upstream 231291 48030892 ~ 48036585 (+)
LOC110493997 LOC106565193 coding upstream 241214 48001270 ~ 48026662 (+)
LOC110494009 LOC106565181 coding downstream 39733 48307825 ~ 48329446 (+)
tpgs2 tpgs2 coding downstream 80873 48348965 ~ 48354058 (+)
LOC110494013 LOC106565177 coding downstream 121001 48389082 ~ 48424478 (+)
LOC110494016 LOC106565178 coding downstream 241785 48509877 ~ 48515292 (+)
LOC110494018 LOC106565175 coding downstream 311218 48579310 ~ 48583667 (+)
G1457155 NA non-coding upstream 143 48267420 ~ 48267733 (+)
G1457154 NA non-coding upstream 949 48266546 ~ 48266927 (+)
G1457153 NA non-coding upstream 1691 48265964 ~ 48266185 (+)
G1457137 NA non-coding upstream 67520 48200041 ~ 48200356 (+)
G1457093 NA non-coding upstream 180054 48087605 ~ 48087822 (+)
G1457157 NA non-coding downstream 530 48268622 ~ 48268881 (+)
G1457158 NA non-coding downstream 1281 48269373 ~ 48270046 (+)
G1457210 NA non-coding downstream 106859 48374951 ~ 48375172 (+)
G1457214 NA non-coding downstream 115639 48383731 ~ 48383983 (+)
G1457215 NA non-coding downstream 118910 48387002 ~ 48387756 (+)
G1456969 NA other upstream 428506 47833580 ~ 47839370 (+)
LOC100135862 LOC106565314 other upstream 460395 47805358 ~ 47807518 (+)
G1456570 NA other upstream 1039080 47228219 ~ 47228796 (+)
G1454824 NA other upstream 2409375 45856249 ~ 45858501 (+)
bsnb LOC106565168 other downstream 425229 48693321 ~ 48814670 (+)
erc2 LOC106583361 other downstream 654715 48866589 ~ 49040356 (+)
G1458807 NA other downstream 1170914 49439006 ~ 49439329 (+)
LOC110494957 qrich1 other downstream 1913073 50181045 ~ 50192699 (+)

Expression


Co-expression Network