G1457210


Basic Information

Item Value
gene id G1457210
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 48374951 ~ 48375172 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1667129
gctggggtgttaagcatgttccagtttaggtcgcctagcagcacgagctctgaagatagatggggggcaatcagttcacatatggtgtccagagcacagctgggggcagagggtggtctatagcagacggcaacggtgagagacttgtttttagagaggtggatttttaaaagtagaagttcaaattgtttgggtacagacctggatagtaggacagaactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1667129 True 222 lncRNA 0.49 1 48374951 48375172

Neighbor

gene id symbol gene type direction distance location
tpgs2 tpgs2 coding upstream 20893 48348965 ~ 48354058 (+)
LOC110494009 LOC106565181 coding upstream 45505 48307825 ~ 48329446 (+)
ubap2a LOC106565184 coding upstream 139760 48194992 ~ 48235191 (+)
dcaf12 LOC106565186 coding upstream 195688 48152982 ~ 48179263 (+)
ubap1 LOC106565187 coding upstream 227707 48103537 ~ 48147244 (+)
LOC110494013 LOC106565177 coding downstream 13921 48389082 ~ 48424478 (+)
LOC110494016 LOC106565178 coding downstream 134705 48509877 ~ 48515292 (+)
LOC110494018 LOC106565175 coding downstream 204138 48579310 ~ 48583667 (+)
LOC110494023 LOC106565171 coding downstream 256980 48632152 ~ 48634553 (+)
bap1 LOC106565169 coding downstream 301835 48677007 ~ 48690097 (+)
G1457158 NA non-coding upstream 104905 48269373 ~ 48270046 (+)
G1457157 NA non-coding upstream 106070 48268622 ~ 48268881 (+)
G1457156 NA non-coding upstream 106859 48267876 ~ 48268092 (+)
G1457155 NA non-coding upstream 107218 48267420 ~ 48267733 (+)
G1457154 NA non-coding upstream 108024 48266546 ~ 48266927 (+)
G1457214 NA non-coding downstream 8559 48383731 ~ 48383983 (+)
G1457215 NA non-coding downstream 11830 48387002 ~ 48387756 (+)
G1457188 NA non-coding downstream 81648 48456820 ~ 48472295 (+)
G1457311 NA non-coding downstream 199827 48574999 ~ 48575223 (+)
glrx LOC106565191 other upstream 338368 48030892 ~ 48036585 (+)
G1456969 NA other upstream 535581 47833580 ~ 47839370 (+)
LOC100135862 LOC106565314 other upstream 567470 47805358 ~ 47807518 (+)
G1456570 NA other upstream 1146155 47228219 ~ 47228796 (+)
G1454824 NA other upstream 2516450 45856249 ~ 45858501 (+)
bsnb LOC106565168 other downstream 318149 48693321 ~ 48814670 (+)
erc2 LOC106583361 other downstream 547635 48866589 ~ 49040356 (+)
G1458807 NA other downstream 1063834 49439006 ~ 49439329 (+)
LOC110494957 qrich1 other downstream 1805993 50181045 ~ 50192699 (+)

Expression


Co-expression Network