Gene
RNA
| Item | Value |
|---|---|
| gene id | G1457311 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 48574999 ~ 48575223 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1667249 | True | 225 | lncRNA | 0.50 | 1 | 48574999 | 48575223 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494016 | LOC106565178 | coding | upstream | 59707 | 48509877 ~ 48515292 (+) |
| LOC110494013 | LOC106565177 | coding | upstream | 150521 | 48389082 ~ 48424478 (+) |
| tpgs2 | tpgs2 | coding | upstream | 220941 | 48348965 ~ 48354058 (+) |
| LOC110494009 | LOC106565181 | coding | upstream | 245553 | 48307825 ~ 48329446 (+) |
| ubap2a | LOC106565184 | coding | upstream | 339808 | 48194992 ~ 48235191 (+) |
| LOC110494018 | LOC106565175 | coding | downstream | 4087 | 48579310 ~ 48583667 (+) |
| LOC110494023 | LOC106565171 | coding | downstream | 56929 | 48632152 ~ 48634553 (+) |
| bap1 | LOC106565169 | coding | downstream | 101784 | 48677007 ~ 48690097 (+) |
| bsnb | LOC106565168 | coding | downstream | 118101 | 48693321 ~ 48814670 (+) |
| erc2 | LOC106583361 | coding | downstream | 291366 | 48866589 ~ 49040356 (+) |
| G1457188 | NA | non-coding | upstream | 102704 | 48456820 ~ 48472295 (+) |
| G1457215 | NA | non-coding | upstream | 187243 | 48387002 ~ 48387756 (+) |
| G1457214 | NA | non-coding | upstream | 191016 | 48383731 ~ 48383983 (+) |
| G1457210 | NA | non-coding | upstream | 199827 | 48374951 ~ 48375172 (+) |
| G1457973 | NA | non-coding | downstream | 32997 | 48608220 ~ 48609579 (+) |
| G1457988 | NA | non-coding | downstream | 46211 | 48621434 ~ 48710016 (+) |
| G1458072 | NA | non-coding | downstream | 174321 | 48749544 ~ 48749764 (+) |
| G1458083 | NA | non-coding | downstream | 188403 | 48763626 ~ 48763825 (+) |
| G1458033 | NA | non-coding | downstream | 197834 | 48773057 ~ 48773274 (+) |
| glrx | LOC106565191 | other | upstream | 538416 | 48030892 ~ 48036585 (+) |
| G1456969 | NA | other | upstream | 735629 | 47833580 ~ 47839370 (+) |
| LOC100135862 | LOC106565314 | other | upstream | 767518 | 47805358 ~ 47807518 (+) |
| G1456570 | NA | other | upstream | 1346203 | 47228219 ~ 47228796 (+) |
| G1458807 | NA | other | downstream | 863783 | 49439006 ~ 49439329 (+) |
| LOC110494957 | qrich1 | other | downstream | 1605942 | 50181045 ~ 50192699 (+) |
| atxn7l2a | LOC106565127 | other | downstream | 1855584 | 50427145 ~ 50437612 (+) |
