G1457988



Basic Information


Item Value
gene id G1457988
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 48621434 ~ 48710016 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1668033
ccccccccccccccccccccccccccccccaaaaaaaagaaaaaaaaagtagtgcactaaatagggaataggctgccatttgagaCGTAGACAGTTTTGGTGGTGTGAGGCTGAAGACGAGGACGCATAAAAACAACGTCATGGCAGCCATGCAATTTAGAGTGGCATTAACAGGGTCTAACATATGGCCGTGATATGCCATCAACCAATTGCAGGATTGTCAATCATCCATGCTCATCTCGTCATCTGAAAAGGGAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1668033 True 258 lncRNA 0.49 2 48621434 48710016

Neighbor


gene id symbol gene type direction distance location
LOC110494018 LOC106565175 coding upstream 37767 48579310 ~ 48583667 (+)
LOC110494016 LOC106565178 coding upstream 106142 48509877 ~ 48515292 (+)
LOC110494013 LOC106565177 coding upstream 196956 48389082 ~ 48424478 (+)
tpgs2 tpgs2 coding upstream 267376 48348965 ~ 48354058 (+)
LOC110494009 LOC106565181 coding upstream 291988 48307825 ~ 48329446 (+)
erc2 LOC106583361 coding downstream 156573 48866589 ~ 49040356 (+)
LOC118940102 NA coding downstream 267620 48977636 ~ 48980567 (+)
LOC110494028 LOC106565296 coding downstream 299992 48977901 ~ 49120417 (+)
LOC118940474 NA coding downstream 323946 49033962 ~ 49035924 (+)
LOC110494034 LOC106565158 coding downstream 599136 49309152 ~ 49319617 (+)
G1457973 NA non-coding upstream 11855 48608220 ~ 48609579 (+)
G1457311 NA non-coding upstream 46211 48574999 ~ 48575223 (+)
G1457188 NA non-coding upstream 149139 48456820 ~ 48472295 (+)
G1457215 NA non-coding upstream 233678 48387002 ~ 48387756 (+)
G1458072 NA non-coding downstream 39528 48749544 ~ 48749764 (+)
G1458083 NA non-coding downstream 53610 48763626 ~ 48763825 (+)
G1458033 NA non-coding downstream 63041 48773057 ~ 48773274 (+)
G1458093 NA non-coding downstream 65449 48775465 ~ 48775684 (+)
bsnb LOC106565168 non-coding downstream 95896 48693321 ~ 48814670 (+)
glrx LOC106565191 other upstream 584851 48030892 ~ 48036585 (+)
G1456969 NA other upstream 782064 47833580 ~ 47839370 (+)
LOC100135862 LOC106565314 other upstream 813953 47805358 ~ 47807518 (+)
G1456570 NA other upstream 1392638 47228219 ~ 47228796 (+)
G1458807 NA other downstream 728990 49439006 ~ 49439329 (+)
LOC110494957 qrich1 other downstream 1471149 50181045 ~ 50192699 (+)
atxn7l2a LOC106565127 other downstream 1720791 50427145 ~ 50437612 (+)
G1459769 NA other downstream 2066513 50776529 ~ 50777072 (+)

Expression



Co-expression Network