G1458033


Basic Information

Item Value
gene id G1458033
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 48773057 ~ 48773274 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1668088
CCAttggcacttaaccctaattgcccctgtaagtggctctggataggAATGtcagctaaatgactaaaatgtaaatgaccacctatcatcatcattacaacATATCATTCTTATCCCCCTTCTCCTCGTCATCTCTATCCCCAAGCATCAGCTGTTTACCATGCACCAGGTTTGGTATCTTTACCTCTCTTTTTATTTCACCAATCATAATGTTAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1668088 True 218 lncRNA 0.40 1 48773057 48773274

Neighbor

gene id symbol gene type direction distance location
bap1 LOC106565169 coding upstream 82960 48677007 ~ 48690097 (+)
LOC110494023 LOC106565171 coding upstream 138504 48632152 ~ 48634553 (+)
LOC110494018 LOC106565175 coding upstream 189390 48579310 ~ 48583667 (+)
LOC110494016 LOC106565178 coding upstream 257765 48509877 ~ 48515292 (+)
LOC110494013 LOC106565177 coding upstream 348579 48389082 ~ 48424478 (+)
erc2 LOC106583361 coding downstream 93315 48866589 ~ 49040356 (+)
LOC118940102 NA coding downstream 204362 48977636 ~ 48980567 (+)
LOC110494028 LOC106565296 coding downstream 236734 48977901 ~ 49120417 (+)
LOC118940474 NA coding downstream 260688 49033962 ~ 49035924 (+)
LOC110494034 LOC106565158 coding downstream 535878 49309152 ~ 49319617 (+)
G1458083 NA non-coding upstream 9232 48763626 ~ 48763825 (+)
G1458072 NA non-coding upstream 23293 48749544 ~ 48749764 (+)
G1457988 NA non-coding upstream 63041 48621434 ~ 48710016 (+)
G1457973 NA non-coding upstream 163478 48608220 ~ 48609579 (+)
G1457311 NA non-coding upstream 197834 48574999 ~ 48575223 (+)
G1458093 NA non-coding downstream 2191 48775465 ~ 48775684 (+)
bsnb LOC106565168 non-coding downstream 32638 48693321 ~ 48814670 (+)
G1458115 NA non-coding downstream 48023 48821297 ~ 48821524 (+)
G1458121 NA non-coding downstream 56002 48829276 ~ 48829484 (+)
G1458123 NA non-coding downstream 57047 48830321 ~ 48830908 (+)
glrx LOC106565191 other upstream 736474 48030892 ~ 48036585 (+)
G1456969 NA other upstream 933687 47833580 ~ 47839370 (+)
LOC100135862 LOC106565314 other upstream 965576 47805358 ~ 47807518 (+)
G1458807 NA other downstream 665732 49439006 ~ 49439329 (+)
LOC110494957 qrich1 other downstream 1407891 50181045 ~ 50192699 (+)
atxn7l2a LOC106565127 other downstream 1657533 50427145 ~ 50437612 (+)
G1459769 NA other downstream 2003255 50776529 ~ 50777072 (+)

Expression


Co-expression Network