Gene
RNA
| Item | Value |
|---|---|
| gene id | G1458093 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 48775465 ~ 48775684 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1668148 | True | 220 | lncRNA | 0.62 | 1 | 48775465 | 48775684 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| bap1 | LOC106565169 | coding | upstream | 85368 | 48677007 ~ 48690097 (+) |
| LOC110494023 | LOC106565171 | coding | upstream | 140912 | 48632152 ~ 48634553 (+) |
| LOC110494018 | LOC106565175 | coding | upstream | 191798 | 48579310 ~ 48583667 (+) |
| LOC110494016 | LOC106565178 | coding | upstream | 260173 | 48509877 ~ 48515292 (+) |
| LOC110494013 | LOC106565177 | coding | upstream | 350987 | 48389082 ~ 48424478 (+) |
| erc2 | LOC106583361 | coding | downstream | 90905 | 48866589 ~ 49040356 (+) |
| LOC118940102 | NA | coding | downstream | 201952 | 48977636 ~ 48980567 (+) |
| LOC110494028 | LOC106565296 | coding | downstream | 234324 | 48977901 ~ 49120417 (+) |
| LOC118940474 | NA | coding | downstream | 258278 | 49033962 ~ 49035924 (+) |
| LOC110494034 | LOC106565158 | coding | downstream | 533468 | 49309152 ~ 49319617 (+) |
| G1458033 | NA | non-coding | upstream | 2191 | 48773057 ~ 48773274 (+) |
| G1458083 | NA | non-coding | upstream | 11640 | 48763626 ~ 48763825 (+) |
| G1458072 | NA | non-coding | upstream | 25701 | 48749544 ~ 48749764 (+) |
| G1457988 | NA | non-coding | upstream | 65449 | 48621434 ~ 48710016 (+) |
| G1457973 | NA | non-coding | upstream | 165886 | 48608220 ~ 48609579 (+) |
| bsnb | LOC106565168 | non-coding | downstream | 30228 | 48693321 ~ 48814670 (+) |
| G1458115 | NA | non-coding | downstream | 45613 | 48821297 ~ 48821524 (+) |
| G1458121 | NA | non-coding | downstream | 53592 | 48829276 ~ 48829484 (+) |
| G1458123 | NA | non-coding | downstream | 54637 | 48830321 ~ 48830908 (+) |
| G1458124 | NA | non-coding | downstream | 57114 | 48832798 ~ 48833281 (+) |
| glrx | LOC106565191 | other | upstream | 738882 | 48030892 ~ 48036585 (+) |
| G1456969 | NA | other | upstream | 936095 | 47833580 ~ 47839370 (+) |
| LOC100135862 | LOC106565314 | other | upstream | 967984 | 47805358 ~ 47807518 (+) |
| G1458807 | NA | other | downstream | 663322 | 49439006 ~ 49439329 (+) |
| LOC110494957 | qrich1 | other | downstream | 1405481 | 50181045 ~ 50192699 (+) |
| atxn7l2a | LOC106565127 | other | downstream | 1655123 | 50427145 ~ 50437612 (+) |
| G1459769 | NA | other | downstream | 2000845 | 50776529 ~ 50777072 (+) |
