G1458115


Basic Information

Item Value
gene id G1458115
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 48821297 ~ 48821524 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1668170
gcccagtccggggcccgctacgagggtccccagtccagggCCCGCTACGAGGGTCCCTAGTCCAGGGCCCGGTACAAGGGTCCCTAGTCCGGTGTCGGAAacgagggtccccgcaccagaggtgccaccaaagtggggtgagccagtggtggagcggggtctgcgtcccgcaccTGAGCCGCCACCACGGATGGATGCCCACTCAGACattcccctataggttcaggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1668170 True 228 lncRNA 0.68 1 48821297 48821524

Neighbor

gene id symbol gene type direction distance location
bsnb LOC106565168 coding upstream 8074 48693321 ~ 48814670 (+)
bap1 LOC106565169 coding upstream 131200 48677007 ~ 48690097 (+)
LOC110494023 LOC106565171 coding upstream 186744 48632152 ~ 48634553 (+)
LOC110494018 LOC106565175 coding upstream 237630 48579310 ~ 48583667 (+)
LOC110494016 LOC106565178 coding upstream 306005 48509877 ~ 48515292 (+)
erc2 LOC106583361 coding downstream 45065 48866589 ~ 49040356 (+)
LOC118940102 NA coding downstream 156112 48977636 ~ 48980567 (+)
LOC110494028 LOC106565296 coding downstream 188484 48977901 ~ 49120417 (+)
LOC118940474 NA coding downstream 212438 49033962 ~ 49035924 (+)
LOC110494034 LOC106565158 coding downstream 487628 49309152 ~ 49319617 (+)
G1458093 NA non-coding upstream 45613 48775465 ~ 48775684 (+)
G1458033 NA non-coding upstream 48023 48773057 ~ 48773274 (+)
G1458083 NA non-coding upstream 57472 48763626 ~ 48763825 (+)
G1458072 NA non-coding upstream 71533 48749544 ~ 48749764 (+)
G1458121 NA non-coding downstream 7752 48829276 ~ 48829484 (+)
G1458123 NA non-coding downstream 8797 48830321 ~ 48830908 (+)
G1458124 NA non-coding downstream 11274 48832798 ~ 48833281 (+)
G1458139 NA non-coding downstream 25873 48847397 ~ 48847712 (+)
G1458140 NA non-coding downstream 26504 48848028 ~ 48848235 (+)
LOC110494013 LOC106565177 other upstream 396892 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 784714 48030892 ~ 48036585 (+)
G1456969 NA other upstream 981927 47833580 ~ 47839370 (+)
LOC100135862 LOC106565314 other upstream 1013816 47805358 ~ 47807518 (+)
G1458807 NA other downstream 617482 49439006 ~ 49439329 (+)
LOC110494957 qrich1 other downstream 1359641 50181045 ~ 50192699 (+)
atxn7l2a LOC106565127 other downstream 1609283 50427145 ~ 50437612 (+)
G1459769 NA other downstream 1955005 50776529 ~ 50777072 (+)

Expression


Co-expression Network