G1458139


Basic Information

Item Value
gene id G1458139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 48847397 ~ 48847712 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1668202
ccctattactagcctgttcaacctctctttcgtatcgtctgagatccccaaatattggaaagctgccacggtcatccccctcttcaaagcgggagacactctagacccaaactgtatagacctatatctatcctaccctgcctttctaaggtcttcgaacagatcaccgaccatttcgaatcccactgtaccttctccgctatgcaatctggtttccgagctggtcatgggtgcacctcagccacgctccaggtcctaaacgatatcataaccaccattgataaaagacaatactgtgaagtcgtattcattgacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1668202 True 316 lncRNA 0.47 1 48847397 48847712

Neighbor

gene id symbol gene type direction distance location
bsnb LOC106565168 coding upstream 34174 48693321 ~ 48814670 (+)
bap1 LOC106565169 coding upstream 157300 48677007 ~ 48690097 (+)
LOC110494023 LOC106565171 coding upstream 212844 48632152 ~ 48634553 (+)
LOC110494018 LOC106565175 coding upstream 263730 48579310 ~ 48583667 (+)
LOC110494016 LOC106565178 coding upstream 332105 48509877 ~ 48515292 (+)
erc2 LOC106583361 coding downstream 18877 48866589 ~ 49040356 (+)
LOC118940102 NA coding downstream 129924 48977636 ~ 48980567 (+)
LOC110494028 LOC106565296 coding downstream 162296 48977901 ~ 49120417 (+)
LOC118940474 NA coding downstream 186250 49033962 ~ 49035924 (+)
LOC110494034 LOC106565158 coding downstream 461440 49309152 ~ 49319617 (+)
G1458124 NA non-coding upstream 14116 48832798 ~ 48833281 (+)
G1458123 NA non-coding upstream 16489 48830321 ~ 48830908 (+)
G1458121 NA non-coding upstream 17913 48829276 ~ 48829484 (+)
G1458115 NA non-coding upstream 25873 48821297 ~ 48821524 (+)
G1458140 NA non-coding downstream 316 48848028 ~ 48848235 (+)
G1458176 NA non-coding downstream 97773 48945485 ~ 48950296 (+)
G1458133 NA non-coding downstream 125493 48973205 ~ 49003577 (+)
G1458226 NA non-coding downstream 171675 49019387 ~ 49020680 (+)
LOC110494013 LOC106565177 other upstream 422992 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 810814 48030892 ~ 48036585 (+)
G1456969 NA other upstream 1008027 47833580 ~ 47839370 (+)
LOC100135862 LOC106565314 other upstream 1039916 47805358 ~ 47807518 (+)
G1458807 NA other downstream 591294 49439006 ~ 49439329 (+)
LOC110494957 qrich1 other downstream 1333453 50181045 ~ 50192699 (+)
atxn7l2a LOC106565127 other downstream 1583095 50427145 ~ 50437612 (+)
G1459769 NA other downstream 1928817 50776529 ~ 50777072 (+)

Expression


Co-expression Network