G1458265


Basic Information

Item Value
gene id G1458265
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 49146507 ~ 49168867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1668354
cTTACCTACACACGTGTTGTCATGGAGGGTCCAGCCTGTTCTGCACTCCAGACACAGGTCATTCTGAGGCCCTGAGCATTCCTTACAGGAGTCCATACAGCCTCGGACCAGAACTACCTGGGACAGCACTGAGTACAGCCCTGCAGCAAGGAGGGGCCAGCCAGTCCTCATCACACCCTCCCTATCAAGCAGCCACTGAGACAGTATGAGAGAGTGGATTGGACCACCGAGTTCTCTAAGTTTTTCGACGCTGAGCGTGAACAGCAAACGGTTTTGTCCGAAGGCACCCTTCAAATGAATGACTGAACTGTGCAAGTCTGTGTGGGACCGCTGTCTTTCTACTCTGTTGAGTTCAGCTGTCGTCGTTCTTGTTGCTCATCGGATCTGGTTTGCGTTCAGACAGGCTAGCCCTTGACCAATCACAACCTCTTGAGGGGCAAAAGGGTCCGGGACTACTGTACAAGTCGGTCAATCAGAGCACCAAGCG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1668354 True 487 lncRNA 0.53 2 49146507 49168867

Neighbor

gene id symbol gene type direction distance location
LOC110494028 LOC106565296 coding upstream 26090 48977901 ~ 49120417 (+)
LOC118940474 NA coding upstream 110583 49033962 ~ 49035924 (+)
LOC118940102 NA coding upstream 165940 48977636 ~ 48980567 (+)
erc2 LOC106583361 coding upstream 208486 48866589 ~ 49040356 (+)
bsnb LOC106565168 coding upstream 333284 48693321 ~ 48814670 (+)
LOC110494034 LOC106565158 coding downstream 140285 49309152 ~ 49319617 (+)
cacna1da LOC106583449 coding downstream 310049 49478916 ~ 49594500 (+)
LOC110494954 LOC106565153 coding downstream 435796 49604663 ~ 49657967 (+)
LOC110494957 qrich1 coding downstream 1012178 50181045 ~ 50192699 (+)
LOC110494976 LOC106565138 coding downstream 1028236 50197103 ~ 50207320 (+)
G1458264 NA non-coding upstream 3859 49142070 ~ 49142648 (+)
G1458237 NA non-coding upstream 62854 49068027 ~ 49083653 (+)
G1458226 NA non-coding upstream 125827 49019387 ~ 49020680 (+)
G1458133 NA non-coding upstream 142930 48973205 ~ 49003577 (+)
G1458293 NA non-coding downstream 13035 49181902 ~ 49183741 (+)
G1458294 LOC106565161 non-coding downstream 15823 49184690 ~ 49220831 (+)
G1458301 NA non-coding downstream 41083 49209950 ~ 49269648 (+)
G1458725 NA non-coding downstream 161868 49330735 ~ 49332979 (+)
G1458811 NA non-coding downstream 275941 49444808 ~ 49445154 (+)
LOC110494013 LOC106565177 other upstream 722102 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 1109924 48030892 ~ 48036585 (+)
G1456969 NA other upstream 1307137 47833580 ~ 47839370 (+)
G1458807 NA other downstream 270139 49439006 ~ 49439329 (+)
atxn7l2a LOC106565127 other downstream 1261940 50427145 ~ 50437612 (+)
G1459769 NA other downstream 1607662 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 1726073 50894903 ~ 50897444 (+)

Expression


Co-expression Network