Gene
RNA
| Item | Value |
|---|---|
| gene id | G1458807 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 49439006 ~ 49439329 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| retrotransposon-like protein 1, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1668956 | True | 324 | TUCP | 0.54 | 1 | 49439006 | 49439329 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494034 | LOC106565158 | coding | upstream | 119389 | 49309152 ~ 49319617 (+) |
| LOC110494028 | LOC106565296 | coding | upstream | 318589 | 48977901 ~ 49120417 (+) |
| LOC118940474 | NA | coding | upstream | 403082 | 49033962 ~ 49035924 (+) |
| LOC118940102 | NA | coding | upstream | 458439 | 48977636 ~ 48980567 (+) |
| erc2 | LOC106583361 | coding | upstream | 500985 | 48866589 ~ 49040356 (+) |
| cacna1da | LOC106583449 | coding | downstream | 39587 | 49478916 ~ 49594500 (+) |
| LOC110494954 | LOC106565153 | coding | downstream | 165334 | 49604663 ~ 49657967 (+) |
| LOC110494957 | qrich1 | coding | downstream | 741716 | 50181045 ~ 50192699 (+) |
| LOC110494976 | LOC106565138 | coding | downstream | 757774 | 50197103 ~ 50207320 (+) |
| LOC110494984 | LOC106565139 | coding | downstream | 783312 | 50222641 ~ 50229675 (+) |
| G1458725 | NA | non-coding | upstream | 106027 | 49330735 ~ 49332979 (+) |
| G1458301 | NA | non-coding | upstream | 169358 | 49209950 ~ 49269648 (+) |
| G1458294 | LOC106565161 | non-coding | upstream | 218175 | 49184690 ~ 49220831 (+) |
| G1458293 | NA | non-coding | upstream | 255265 | 49181902 ~ 49183741 (+) |
| G1458265 | NA | non-coding | upstream | 270139 | 49146507 ~ 49168867 (+) |
| G1458811 | NA | non-coding | downstream | 5479 | 49444808 ~ 49445154 (+) |
| G1458919 | NA | non-coding | downstream | 26515 | 49465844 ~ 49466045 (+) |
| G1458927 | NA | non-coding | downstream | 29952 | 49469281 ~ 49469561 (+) |
| G1458931 | NA | non-coding | downstream | 31585 | 49470914 ~ 49471432 (+) |
| G1458935 | NA | non-coding | downstream | 36216 | 49475545 ~ 49475959 (+) |
| bsnb | LOC106565168 | other | upstream | 717762 | 48693321 ~ 48814670 (+) |
| LOC110494013 | LOC106565177 | other | upstream | 1014601 | 48389082 ~ 48424478 (+) |
| glrx | LOC106565191 | other | upstream | 1402423 | 48030892 ~ 48036585 (+) |
| G1456969 | NA | other | upstream | 1599636 | 47833580 ~ 47839370 (+) |
| atxn7l2a | LOC106565127 | other | downstream | 991478 | 50427145 ~ 50437612 (+) |
| G1459769 | NA | other | downstream | 1337200 | 50776529 ~ 50777072 (+) |
| LOC110494047 | btg2 | other | downstream | 1455611 | 50894903 ~ 50897444 (+) |
| G1460249 | LOC106565103 | other | downstream | 1640803 | 51080132 ~ 51137770 (+) |
