G1458811


Basic Information

Item Value
gene id G1458811
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 49444808 ~ 49445154 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1668960
aacaggtcagggttccatagccgcaggcagaacagttgaaactgtagcagcagcacgaccaggtggactggggacagcaaggagtcatcaggccaggtagtcctgaggcatggttctagggctcaggtcctccaagagagagaaaaagagaaagagagagagaaaaagagagagagaaagagagagagaggacagagaaaaagagagagagaggagagagaaaaaagagagagagagaattagagagagcatacttaaattcacacaggacaccggctaagacaggagaaatactccagatataacagactgaccctagccccccgacacaaactattgcagaataa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1668960 True 347 lncRNA 0.48 1 49444808 49445154

Neighbor

gene id symbol gene type direction distance location
LOC110494034 LOC106565158 coding upstream 125191 49309152 ~ 49319617 (+)
LOC110494028 LOC106565296 coding upstream 324391 48977901 ~ 49120417 (+)
LOC118940474 NA coding upstream 408884 49033962 ~ 49035924 (+)
LOC118940102 NA coding upstream 464241 48977636 ~ 48980567 (+)
erc2 LOC106583361 coding upstream 506787 48866589 ~ 49040356 (+)
cacna1da LOC106583449 coding downstream 33762 49478916 ~ 49594500 (+)
LOC110494954 LOC106565153 coding downstream 159509 49604663 ~ 49657967 (+)
LOC110494957 qrich1 coding downstream 735891 50181045 ~ 50192699 (+)
LOC110494976 LOC106565138 coding downstream 751949 50197103 ~ 50207320 (+)
LOC110494984 LOC106565139 coding downstream 777487 50222641 ~ 50229675 (+)
G1458725 NA non-coding upstream 111829 49330735 ~ 49332979 (+)
G1458301 NA non-coding upstream 175160 49209950 ~ 49269648 (+)
G1458294 LOC106565161 non-coding upstream 223977 49184690 ~ 49220831 (+)
G1458293 NA non-coding upstream 261067 49181902 ~ 49183741 (+)
G1458265 NA non-coding upstream 275941 49146507 ~ 49168867 (+)
G1458919 NA non-coding downstream 20690 49465844 ~ 49466045 (+)
G1458927 NA non-coding downstream 24127 49469281 ~ 49469561 (+)
G1458931 NA non-coding downstream 25760 49470914 ~ 49471432 (+)
G1458935 NA non-coding downstream 30391 49475545 ~ 49475959 (+)
G1458807 NA other upstream 5479 49439006 ~ 49439329 (+)
bsnb LOC106565168 other upstream 723564 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1020403 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 1408225 48030892 ~ 48036585 (+)
atxn7l2a LOC106565127 other downstream 985653 50427145 ~ 50437612 (+)
G1459769 NA other downstream 1331375 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 1449786 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 1634978 51080132 ~ 51137770 (+)

Expression


Co-expression Network