G1458931


Basic Information

Item Value
gene id G1458931
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 49470914 ~ 49471432 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669084
Agaaatgtcatgtactgtcatgttgtcttgtctctgtcctttcccttcaccctgtctccctctgctggtcgtgttaggttaccttttctcccccgctttcccccagctgtcccttgtctcctctaactacccattcaccccgttccccacctgttccctttttccctctgattaggtccctatatctctctctgtttctgctcctgtccttgtcggattcttgtttgtttgtgtcattcatgcctgaaccagaccgccgtcatgtttgctgtaaccttgtcctgtcctgtcggaatctgccggtccatctgagcctacctatgtttggtaattaaagaagctctgtttaagttgattcgcttttgggtcctcattcacgcaccgtaacagaagaatccgaccaagaatggacccagcgacttcggatcctctccactcagccgtcgagatccagggagcgatgctaggcagacacaagcaggaattgtctgctgctcgacatgccgttgagaccctggc

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669084 True 519 lncRNA 0.51 1 49470914 49471432

Neighbor

gene id symbol gene type direction distance location
LOC110494034 LOC106565158 coding upstream 151297 49309152 ~ 49319617 (+)
LOC110494028 LOC106565296 coding upstream 350497 48977901 ~ 49120417 (+)
LOC118940474 NA coding upstream 434990 49033962 ~ 49035924 (+)
LOC118940102 NA coding upstream 490347 48977636 ~ 48980567 (+)
erc2 LOC106583361 coding upstream 532893 48866589 ~ 49040356 (+)
cacna1da LOC106583449 coding downstream 7484 49478916 ~ 49594500 (+)
LOC110494954 LOC106565153 coding downstream 133231 49604663 ~ 49657967 (+)
LOC110494957 qrich1 coding downstream 709613 50181045 ~ 50192699 (+)
LOC110494976 LOC106565138 coding downstream 725671 50197103 ~ 50207320 (+)
LOC110494984 LOC106565139 coding downstream 751209 50222641 ~ 50229675 (+)
G1458927 NA non-coding upstream 1353 49469281 ~ 49469561 (+)
G1458919 NA non-coding upstream 4869 49465844 ~ 49466045 (+)
G1458811 NA non-coding upstream 25760 49444808 ~ 49445154 (+)
G1458725 NA non-coding upstream 137935 49330735 ~ 49332979 (+)
G1458301 NA non-coding upstream 201266 49209950 ~ 49269648 (+)
G1458935 NA non-coding downstream 4113 49475545 ~ 49475959 (+)
G1458992 NA non-coding downstream 116520 49587952 ~ 49588882 (+)
G1458998 NA non-coding downstream 193074 49664506 ~ 49664931 (+)
G1458997 NA non-coding downstream 195066 49666498 ~ 49667783 (+)
G1458807 NA other upstream 31585 49439006 ~ 49439329 (+)
bsnb LOC106565168 other upstream 749670 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1046509 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 1434331 48030892 ~ 48036585 (+)
atxn7l2a LOC106565127 other downstream 959375 50427145 ~ 50437612 (+)
G1459769 NA other downstream 1305097 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 1423508 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 1608700 51080132 ~ 51137770 (+)

Expression


Co-expression Network