Gene
RNA
| Item | Value |
|---|---|
| gene id | G1459027 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 49669211 ~ 49669740 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1669219 | False | 451 | lncRNA | 0.35 | 1 | 49669211 | 49669661 |
| TU1669222 | True | 530 | lncRNA | 0.35 | 1 | 49669211 | 49669740 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494954 | LOC106565153 | coding | upstream | 11244 | 49604663 ~ 49657967 (+) |
| cacna1da | LOC106583449 | coding | upstream | 74711 | 49478916 ~ 49594500 (+) |
| LOC110494034 | LOC106565158 | coding | upstream | 349594 | 49309152 ~ 49319617 (+) |
| LOC110494028 | LOC106565296 | coding | upstream | 548794 | 48977901 ~ 49120417 (+) |
| LOC110494957 | qrich1 | coding | downstream | 511305 | 50181045 ~ 50192699 (+) |
| LOC110494976 | LOC106565138 | coding | downstream | 527363 | 50197103 ~ 50207320 (+) |
| LOC110494984 | LOC106565139 | coding | downstream | 552901 | 50222641 ~ 50229675 (+) |
| rhoa | rhoa | coding | downstream | 563907 | 50233647 ~ 50239667 (+) |
| zgc:112334 | LOC106565137 | coding | downstream | 583067 | 50252807 ~ 50259008 (+) |
| G1458997 | NA | non-coding | upstream | 1428 | 49666498 ~ 49667783 (+) |
| G1458998 | NA | non-coding | upstream | 4280 | 49664506 ~ 49664931 (+) |
| G1458992 | NA | non-coding | upstream | 80329 | 49587952 ~ 49588882 (+) |
| G1458935 | NA | non-coding | upstream | 193252 | 49475545 ~ 49475959 (+) |
| G1459030 | NA | non-coding | downstream | 2381 | 49672121 ~ 49672345 (+) |
| G1459052 | NA | non-coding | downstream | 38170 | 49707910 ~ 49773572 (+) |
| G1459076 | NA | non-coding | downstream | 86768 | 49756508 ~ 49763510 (+) |
| G1459092 | NA | non-coding | downstream | 113845 | 49783585 ~ 49815087 (+) |
| G1459107 | NA | non-coding | downstream | 163272 | 49833012 ~ 50010633 (+) |
| G1458807 | NA | other | upstream | 229882 | 49439006 ~ 49439329 (+) |
| erc2 | LOC106583361 | other | upstream | 628855 | 48866589 ~ 49040356 (+) |
| bsnb | LOC106565168 | other | upstream | 947967 | 48693321 ~ 48814670 (+) |
| LOC110494013 | LOC106565177 | other | upstream | 1244806 | 48389082 ~ 48424478 (+) |
| glrx | LOC106565191 | other | upstream | 1632628 | 48030892 ~ 48036585 (+) |
| atxn7l2a | LOC106565127 | other | downstream | 761067 | 50427145 ~ 50437612 (+) |
| G1459769 | NA | other | downstream | 1106789 | 50776529 ~ 50777072 (+) |
| LOC110494047 | btg2 | other | downstream | 1225200 | 50894903 ~ 50897444 (+) |
| G1460249 | LOC106565103 | other | downstream | 1410392 | 51080132 ~ 51137770 (+) |
