Gene
RNA
| Item | Value |
|---|---|
| gene id | G1459076 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 49756508 ~ 49763510 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106609042 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1669279 | True | 308 | lncRNA | 0.45 | 2 | 49756508 | 49763510 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494954 | LOC106565153 | coding | upstream | 98541 | 49604663 ~ 49657967 (+) |
| cacna1da | LOC106583449 | coding | upstream | 162008 | 49478916 ~ 49594500 (+) |
| LOC110494034 | LOC106565158 | coding | upstream | 436891 | 49309152 ~ 49319617 (+) |
| LOC110494028 | LOC106565296 | coding | upstream | 636091 | 48977901 ~ 49120417 (+) |
| LOC110494957 | qrich1 | coding | downstream | 417535 | 50181045 ~ 50192699 (+) |
| LOC110494976 | LOC106565138 | coding | downstream | 433593 | 50197103 ~ 50207320 (+) |
| LOC110494984 | LOC106565139 | coding | downstream | 459131 | 50222641 ~ 50229675 (+) |
| rhoa | rhoa | coding | downstream | 470137 | 50233647 ~ 50239667 (+) |
| zgc:112334 | LOC106565137 | coding | downstream | 489297 | 50252807 ~ 50259008 (+) |
| G1459030 | NA | non-coding | upstream | 84163 | 49672121 ~ 49672345 (+) |
| G1459027 | NA | non-coding | upstream | 86768 | 49669211 ~ 49669740 (+) |
| G1458997 | NA | non-coding | upstream | 88725 | 49666498 ~ 49667783 (+) |
| G1458998 | NA | non-coding | upstream | 91577 | 49664506 ~ 49664931 (+) |
| G1458992 | NA | non-coding | upstream | 167626 | 49587952 ~ 49588882 (+) |
| G1459092 | NA | non-coding | downstream | 20075 | 49783585 ~ 49815087 (+) |
| G1459107 | NA | non-coding | downstream | 69502 | 49833012 ~ 50010633 (+) |
| G1459119 | NA | non-coding | downstream | 183761 | 49947271 ~ 50119366 (+) |
| G1459124 | LOC106565166 | non-coding | downstream | 194456 | 49957966 ~ 50121566 (+) |
| G1459132 | NA | non-coding | downstream | 228190 | 49991700 ~ 50032020 (+) |
| G1458807 | NA | other | upstream | 317179 | 49439006 ~ 49439329 (+) |
| erc2 | LOC106583361 | other | upstream | 716152 | 48866589 ~ 49040356 (+) |
| bsnb | LOC106565168 | other | upstream | 1035264 | 48693321 ~ 48814670 (+) |
| LOC110494013 | LOC106565177 | other | upstream | 1332103 | 48389082 ~ 48424478 (+) |
| glrx | LOC106565191 | other | upstream | 1719925 | 48030892 ~ 48036585 (+) |
| atxn7l2a | LOC106565127 | other | downstream | 667297 | 50427145 ~ 50437612 (+) |
| G1459769 | NA | other | downstream | 1013019 | 50776529 ~ 50777072 (+) |
| LOC110494047 | btg2 | other | downstream | 1131430 | 50894903 ~ 50897444 (+) |
| G1460249 | LOC106565103 | other | downstream | 1316622 | 51080132 ~ 51137770 (+) |
