G1459092


Basic Information

Item Value
gene id G1459092
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 49783585 ~ 49815087 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669298
cctctacatgctttgtaagtaggaaaacctgcaaaatcggcagtgtgtcaaatacttgttctcccaacTGTATAGAAGAgggatttattatttttttaaattttatttcacatttatttaaccaggtaggccagttgagaacaagttctcatttacacctgcgacctggccaagataaagcaaagcagtgcgacaaaaactacaacacagagttacacatcaacaaacgtacagtcaataacacaatagaaagatctatgtacagtgtgtacagtgtataTGGGAGGTGAGCGGGGAGCCACCCCTTTTCAACAAACAAAGCCATCCCCCATAGCATAATCGACCATCCTGACCGCTGGGCTCAAGTGTGCATCGAAACAGAATGTAAGCTCATATTAactgaaaaaaaatgtaatgaagtTGTGTTCTCACACCATTTACATCTAAACCACTCCGCAGTCATTGGCTAGAATGTGTCTACAACACTGCACATTGAAGGAGCGACTGAGGTGCTGAGTAAGTTGAAATTCAACTGGGAATTTGGAAAACAACAAGTTAACATGTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669298 True 565 lncRNA 0.40 2 49783585 49815087

Neighbor

gene id symbol gene type direction distance location
LOC110494954 LOC106565153 coding upstream 125618 49604663 ~ 49657967 (+)
cacna1da LOC106583449 coding upstream 189085 49478916 ~ 49594500 (+)
LOC110494034 LOC106565158 coding upstream 463968 49309152 ~ 49319617 (+)
LOC110494028 LOC106565296 coding upstream 663168 48977901 ~ 49120417 (+)
LOC110494957 qrich1 coding downstream 365958 50181045 ~ 50192699 (+)
LOC110494976 LOC106565138 coding downstream 382016 50197103 ~ 50207320 (+)
LOC110494984 LOC106565139 coding downstream 407554 50222641 ~ 50229675 (+)
rhoa rhoa coding downstream 418560 50233647 ~ 50239667 (+)
zgc:112334 LOC106565137 coding downstream 437720 50252807 ~ 50259008 (+)
G1459052 NA non-coding upstream 10013 49707910 ~ 49773572 (+)
G1459076 NA non-coding upstream 20075 49756508 ~ 49763510 (+)
G1459030 NA non-coding upstream 111240 49672121 ~ 49672345 (+)
G1459027 NA non-coding upstream 113845 49669211 ~ 49669740 (+)
G1458997 NA non-coding upstream 115802 49666498 ~ 49667783 (+)
G1459107 NA non-coding downstream 17925 49833012 ~ 50010633 (+)
G1459119 NA non-coding downstream 132184 49947271 ~ 50119366 (+)
G1459124 LOC106565166 non-coding downstream 142879 49957966 ~ 50121566 (+)
G1459132 NA non-coding downstream 176613 49991700 ~ 50032020 (+)
G1459134 NA non-coding downstream 181156 49996243 ~ 50013921 (+)
G1458807 NA other upstream 344256 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 743229 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1062341 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1359180 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 1747002 48030892 ~ 48036585 (+)
atxn7l2a LOC106565127 other downstream 615720 50427145 ~ 50437612 (+)
G1459769 NA other downstream 961442 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 1079853 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 1265045 51080132 ~ 51137770 (+)

Expression


Co-expression Network