Gene
RNA
| Item | Value |
|---|---|
| gene id | G1459107 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 49833012 ~ 50010633 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1669314 | False | 253 | lncRNA | 0.30 | 3 | 49833012 | 50010633 |
| TU1669316 | True | 253 | lncRNA | 0.30 | 3 | 49833012 | 50010633 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494954 | LOC106565153 | coding | upstream | 175045 | 49604663 ~ 49657967 (+) |
| cacna1da | LOC106583449 | coding | upstream | 238512 | 49478916 ~ 49594500 (+) |
| LOC110494034 | LOC106565158 | coding | upstream | 513395 | 49309152 ~ 49319617 (+) |
| LOC110494028 | LOC106565296 | coding | upstream | 712595 | 48977901 ~ 49120417 (+) |
| LOC110494957 | qrich1 | coding | downstream | 170412 | 50181045 ~ 50192699 (+) |
| LOC110494976 | LOC106565138 | coding | downstream | 186470 | 50197103 ~ 50207320 (+) |
| LOC110494984 | LOC106565139 | coding | downstream | 212008 | 50222641 ~ 50229675 (+) |
| rhoa | rhoa | coding | downstream | 223014 | 50233647 ~ 50239667 (+) |
| zgc:112334 | LOC106565137 | coding | downstream | 242174 | 50252807 ~ 50259008 (+) |
| G1459092 | NA | non-coding | upstream | 17925 | 49783585 ~ 49815087 (+) |
| G1459052 | NA | non-coding | upstream | 59440 | 49707910 ~ 49773572 (+) |
| G1459076 | NA | non-coding | upstream | 69502 | 49756508 ~ 49763510 (+) |
| G1459030 | NA | non-coding | upstream | 160667 | 49672121 ~ 49672345 (+) |
| G1459027 | NA | non-coding | upstream | 163272 | 49669211 ~ 49669740 (+) |
| G1459146 | NA | non-coding | downstream | 19857 | 50030490 ~ 50030987 (+) |
| G1459162 | NA | non-coding | downstream | 102342 | 50112975 ~ 50121017 (+) |
| G1459431 | NA | non-coding | downstream | 118412 | 50129045 ~ 50129263 (+) |
| G1459463 | NA | non-coding | downstream | 147440 | 50158073 ~ 50158290 (+) |
| G1459468 | NA | non-coding | downstream | 152415 | 50163048 ~ 50163382 (+) |
| G1458807 | NA | other | upstream | 393683 | 49439006 ~ 49439329 (+) |
| erc2 | LOC106583361 | other | upstream | 792656 | 48866589 ~ 49040356 (+) |
| bsnb | LOC106565168 | other | upstream | 1111768 | 48693321 ~ 48814670 (+) |
| LOC110494013 | LOC106565177 | other | upstream | 1408607 | 48389082 ~ 48424478 (+) |
| glrx | LOC106565191 | other | upstream | 1796429 | 48030892 ~ 48036585 (+) |
| atxn7l2a | LOC106565127 | other | downstream | 420174 | 50427145 ~ 50437612 (+) |
| G1459769 | NA | other | downstream | 765896 | 50776529 ~ 50777072 (+) |
| LOC110494047 | btg2 | other | downstream | 884307 | 50894903 ~ 50897444 (+) |
| G1460249 | LOC106565103 | other | downstream | 1069499 | 51080132 ~ 51137770 (+) |
