G1459119


Basic Information

Item Value
gene id G1459119
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 49947271 ~ 50119366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669328
CACTCCAGAAGCCACACCCACTGCTGCCTGCCATAATTGCCCCACTATTTGGTGACATGATGACATCGGGAGAGGTCATTAGCTCTTGTTCTTCTAAGAAAATGTGCACAGCTCTGTTTTCATGTGAGAAAAGACAGCTAGAAAAGGATACTTACACAGAATGCTTTCTTGACTGTTTGATTCCACTTCACTTTCTGTGGAGCTTTGACCTCCTGGTCACATGCAAGAGAGAAGGACAACTTAATAACAAAGCTatgtaaatatttctaagaagAGACAAATTGTTTGATTAATCCTACTACATTG

Function

NR:

description
uncharacterized protein LOC110494969

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669328 True 306 lncRNA 0.41 2 49947271 50119366

Neighbor

gene id symbol gene type direction distance location
LOC110494954 LOC106565153 coding upstream 289304 49604663 ~ 49657967 (+)
cacna1da LOC106583449 coding upstream 352771 49478916 ~ 49594500 (+)
LOC110494034 LOC106565158 coding upstream 627654 49309152 ~ 49319617 (+)
LOC110494028 LOC106565296 coding upstream 826854 48977901 ~ 49120417 (+)
LOC110494957 qrich1 coding downstream 61679 50181045 ~ 50192699 (+)
LOC110494976 LOC106565138 coding downstream 77737 50197103 ~ 50207320 (+)
LOC110494984 LOC106565139 coding downstream 103275 50222641 ~ 50229675 (+)
rhoa rhoa coding downstream 114281 50233647 ~ 50239667 (+)
zgc:112334 LOC106565137 coding downstream 133441 50252807 ~ 50259008 (+)
G1459092 NA non-coding upstream 132184 49783585 ~ 49815087 (+)
G1459052 NA non-coding upstream 173699 49707910 ~ 49773572 (+)
G1459076 NA non-coding upstream 183761 49756508 ~ 49763510 (+)
G1459030 NA non-coding upstream 274926 49672121 ~ 49672345 (+)
G1459027 NA non-coding upstream 277531 49669211 ~ 49669740 (+)
G1459431 NA non-coding downstream 9679 50129045 ~ 50129263 (+)
G1459463 NA non-coding downstream 38707 50158073 ~ 50158290 (+)
G1459468 NA non-coding downstream 43682 50163048 ~ 50163382 (+)
G1459476 NA non-coding downstream 53626 50172992 ~ 50173200 (+)
G1459478 NA non-coding downstream 55211 50174577 ~ 50174823 (+)
G1458807 NA other upstream 507942 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 906915 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1226027 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1522866 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 1910688 48030892 ~ 48036585 (+)
atxn7l2a LOC106565127 other downstream 311441 50427145 ~ 50437612 (+)
G1459769 NA other downstream 657163 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 775574 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 960766 51080132 ~ 51137770 (+)

Expression


Co-expression Network