Gene
RNA
| Item | Value |
|---|---|
| gene id | G1459124 |
| gene name | LOC106565166 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 49957966 ~ 50121566 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110494969 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1669333 | True | 583 | lncRNA | 0.42 | 2 | 49957966 | 50121566 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494954 | LOC106565153 | coding | upstream | 299999 | 49604663 ~ 49657967 (+) |
| cacna1da | LOC106583449 | coding | upstream | 363466 | 49478916 ~ 49594500 (+) |
| LOC110494034 | LOC106565158 | coding | upstream | 638349 | 49309152 ~ 49319617 (+) |
| LOC110494028 | LOC106565296 | coding | upstream | 837549 | 48977901 ~ 49120417 (+) |
| LOC110494957 | qrich1 | coding | downstream | 59479 | 50181045 ~ 50192699 (+) |
| LOC110494976 | LOC106565138 | coding | downstream | 75537 | 50197103 ~ 50207320 (+) |
| LOC110494984 | LOC106565139 | coding | downstream | 101075 | 50222641 ~ 50229675 (+) |
| rhoa | rhoa | coding | downstream | 112081 | 50233647 ~ 50239667 (+) |
| zgc:112334 | LOC106565137 | coding | downstream | 131241 | 50252807 ~ 50259008 (+) |
| G1459092 | NA | non-coding | upstream | 142879 | 49783585 ~ 49815087 (+) |
| G1459052 | NA | non-coding | upstream | 184394 | 49707910 ~ 49773572 (+) |
| G1459076 | NA | non-coding | upstream | 194456 | 49756508 ~ 49763510 (+) |
| G1459030 | NA | non-coding | upstream | 285621 | 49672121 ~ 49672345 (+) |
| G1459027 | NA | non-coding | upstream | 288226 | 49669211 ~ 49669740 (+) |
| G1459431 | NA | non-coding | downstream | 7479 | 50129045 ~ 50129263 (+) |
| G1459463 | NA | non-coding | downstream | 36507 | 50158073 ~ 50158290 (+) |
| G1459468 | NA | non-coding | downstream | 41482 | 50163048 ~ 50163382 (+) |
| G1459476 | NA | non-coding | downstream | 51426 | 50172992 ~ 50173200 (+) |
| G1459478 | NA | non-coding | downstream | 53011 | 50174577 ~ 50174823 (+) |
| G1458807 | NA | other | upstream | 518637 | 49439006 ~ 49439329 (+) |
| erc2 | LOC106583361 | other | upstream | 917610 | 48866589 ~ 49040356 (+) |
| bsnb | LOC106565168 | other | upstream | 1236722 | 48693321 ~ 48814670 (+) |
| LOC110494013 | LOC106565177 | other | upstream | 1533561 | 48389082 ~ 48424478 (+) |
| glrx | LOC106565191 | other | upstream | 1921383 | 48030892 ~ 48036585 (+) |
| atxn7l2a | LOC106565127 | other | downstream | 309241 | 50427145 ~ 50437612 (+) |
| G1459769 | NA | other | downstream | 654963 | 50776529 ~ 50777072 (+) |
| LOC110494047 | btg2 | other | downstream | 773374 | 50894903 ~ 50897444 (+) |
| G1460249 | LOC106565103 | other | downstream | 958566 | 51080132 ~ 51137770 (+) |
