G1459146


Basic Information

Item Value
gene id G1459146
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50030490 ~ 50030987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669356
CCAGGGACCTTTCAACCGACTCGCTGCTCCTCTCCCTGGATCCCTGCTGTAGGAAAGACACAAATCACAAAGCTCTCTACAGCACTACTTAAGACACGGGGGACACGCCTGACGCATCTGAAAGGCTACACCGAACTTTACCACTCAACCATGccggtgaggagagagggaaagaaggcgACCTACCATTGAACACCAAACCAGCAATCGACTACCAGACCAGCCATAGACGAACGATCCCTGCTCTGGAGGAAGAACCCTGTTCGGGTAGAACCATACGAACAAACCCGGCTCGGAGAGACCAGAATGAACATTGGCCACCGATCGGGAATCAACTGCAGTGTTATTTTGGCTCATTGCTTCTAGTTAACATATTGCCCTCAATCCCAGCCTATTTATAAGTTTCTA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669356 True 408 lncRNA 0.50 2 50030490 50030987

Neighbor

gene id symbol gene type direction distance location
LOC110494954 LOC106565153 coding upstream 372523 49604663 ~ 49657967 (+)
cacna1da LOC106583449 coding upstream 435990 49478916 ~ 49594500 (+)
LOC110494034 LOC106565158 coding upstream 710873 49309152 ~ 49319617 (+)
LOC110494028 LOC106565296 coding upstream 910073 48977901 ~ 49120417 (+)
LOC110494957 qrich1 coding downstream 150058 50181045 ~ 50192699 (+)
LOC110494976 LOC106565138 coding downstream 166116 50197103 ~ 50207320 (+)
LOC110494984 LOC106565139 coding downstream 191654 50222641 ~ 50229675 (+)
rhoa rhoa coding downstream 202660 50233647 ~ 50239667 (+)
zgc:112334 LOC106565137 coding downstream 221820 50252807 ~ 50259008 (+)
G1459134 NA non-coding upstream 16569 49996243 ~ 50013921 (+)
G1459107 NA non-coding upstream 19857 49833012 ~ 50010633 (+)
G1459092 NA non-coding upstream 215403 49783585 ~ 49815087 (+)
G1459052 NA non-coding upstream 256918 49707910 ~ 49773572 (+)
G1459076 NA non-coding upstream 266980 49756508 ~ 49763510 (+)
G1459162 NA non-coding downstream 81988 50112975 ~ 50121017 (+)
G1459431 NA non-coding downstream 98058 50129045 ~ 50129263 (+)
G1459463 NA non-coding downstream 127086 50158073 ~ 50158290 (+)
G1459468 NA non-coding downstream 132061 50163048 ~ 50163382 (+)
G1459476 NA non-coding downstream 142005 50172992 ~ 50173200 (+)
G1458807 NA other upstream 591161 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 990134 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1309246 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1606085 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 1993907 48030892 ~ 48036585 (+)
atxn7l2a LOC106565127 other downstream 399820 50427145 ~ 50437612 (+)
G1459769 NA other downstream 745542 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 863953 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 1049145 51080132 ~ 51137770 (+)

Expression


Co-expression Network