G1459162



Basic Information


Item Value
gene id G1459162
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50112975 ~ 50121017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1669372
GACTTGTCTTTTCAAAGTGGGAAAAGTAGGACTATAAATTCACTATGGACAGATTGCTTCCTGCCCTGGTAGATTATATTTCTCCTCATTATAGAGATGATAAGACCAGTTCATAAGGTGATCAAGTCTTTCAGGACAGATAAGGTGTTGATTGTTGTTGACAGCTTCCTAGAATAAGGTCACCATGTTATCTAACAGCAGAAGCCTAACAGAGTATAGATACGATCTAAACACTCGACTAGATGAACACAGACATTATAATACTTGTGCTGATGATCCCAGGCGTTGGTGTTGAGGCTGGTGTCATATCTATAGAACAGCTTCATTATCGAACAGAACAGCTTCATTTACACATTAACACAACTATTCTTATTGCTGAAACTTGCTTTGCTATAAAAATAAAAGCAGTGCCACTATAAAAGCACAAATGTGTAGTCTACCTGCTATAGAAGGTGTCTGTATAGTTGTTGGATCACTGATGTGAACTCCCACCAGATCTAAAATCATTTGGGAATGAAATGTGGTATTTAGTTTGTTGGTCAGAATTAACATAGTCATACTAAGAAGATGCTGAAATAAAAGTCAGTCAGATCATGAAGACCTGCAGTACTGATAGATTTGTTTAGATAATGACTCACGTGCAAAGCTGTACCCATCACTGCGTGGTGAGAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1669372 True 672 lncRNA 0.38 2 50112975 50121017

Neighbor


gene id symbol gene type direction distance location
LOC110494954 LOC106565153 coding upstream 455008 49604663 ~ 49657967 (+)
cacna1da LOC106583449 coding upstream 518475 49478916 ~ 49594500 (+)
LOC110494034 LOC106565158 coding upstream 793358 49309152 ~ 49319617 (+)
LOC110494028 LOC106565296 coding upstream 992558 48977901 ~ 49120417 (+)
LOC110494957 qrich1 coding downstream 60028 50181045 ~ 50192699 (+)
LOC110494976 LOC106565138 coding downstream 76086 50197103 ~ 50207320 (+)
LOC110494984 LOC106565139 coding downstream 101624 50222641 ~ 50229675 (+)
rhoa rhoa coding downstream 112630 50233647 ~ 50239667 (+)
zgc:112334 LOC106565137 coding downstream 131790 50252807 ~ 50259008 (+)
G1459132 NA non-coding upstream 80955 49991700 ~ 50032020 (+)
G1459146 NA non-coding upstream 81988 50030490 ~ 50030987 (+)
G1459134 NA non-coding upstream 99054 49996243 ~ 50013921 (+)
G1459107 NA non-coding upstream 102342 49833012 ~ 50010633 (+)
G1459092 NA non-coding upstream 297888 49783585 ~ 49815087 (+)
G1459431 NA non-coding downstream 8028 50129045 ~ 50129263 (+)
G1459463 NA non-coding downstream 37056 50158073 ~ 50158290 (+)
G1459468 NA non-coding downstream 42031 50163048 ~ 50163382 (+)
G1459476 NA non-coding downstream 51975 50172992 ~ 50173200 (+)
G1459478 NA non-coding downstream 53560 50174577 ~ 50174823 (+)
G1458807 NA other upstream 673646 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1072619 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1391731 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1688570 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 2076392 48030892 ~ 48036585 (+)
atxn7l2a LOC106565127 other downstream 309790 50427145 ~ 50437612 (+)
G1459769 NA other downstream 655512 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 773923 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 959115 51080132 ~ 51137770 (+)

Expression



Co-expression Network