G1459468



Basic Information


Item Value
gene id G1459468
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50163048 ~ 50163382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1669716
atccacaagtgttgccctaatctcatcagagatggctctccttccttctctcctttgccctcgtcctcttcttcctctccctcctactcctcttgctctctgtccattgttggcatccattgttcaaaacaggtaatctgacctttgacctatgtgtaggcctatactacagtaaagcagtgattggttagtgatcagttaagctattagtgtttgcacatgtgaggagtgtgtgtgtgacctggtgaataagtgtagcattttgattggttgtgtttggaaaagtaacttcctgttagatttttgtgttttaggtagagaattgtgtgtagtgt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1669716 True 335 lncRNA 0.42 1 50163048 50163382

Neighbor


gene id symbol gene type direction distance location
LOC110494954 LOC106565153 coding upstream 505081 49604663 ~ 49657967 (+)
cacna1da LOC106583449 coding upstream 568548 49478916 ~ 49594500 (+)
LOC110494034 LOC106565158 coding upstream 843431 49309152 ~ 49319617 (+)
LOC110494028 LOC106565296 coding upstream 1042631 48977901 ~ 49120417 (+)
LOC110494957 qrich1 coding downstream 17663 50181045 ~ 50192699 (+)
LOC110494976 LOC106565138 coding downstream 33721 50197103 ~ 50207320 (+)
LOC110494984 LOC106565139 coding downstream 59259 50222641 ~ 50229675 (+)
rhoa rhoa coding downstream 70265 50233647 ~ 50239667 (+)
zgc:112334 LOC106565137 coding downstream 89425 50252807 ~ 50259008 (+)
G1459463 NA non-coding upstream 4758 50158073 ~ 50158290 (+)
G1459431 NA non-coding upstream 33785 50129045 ~ 50129263 (+)
G1459162 NA non-coding upstream 42031 50112975 ~ 50121017 (+)
G1459132 NA non-coding upstream 131028 49991700 ~ 50032020 (+)
G1459476 NA non-coding downstream 9610 50172992 ~ 50173200 (+)
G1459478 NA non-coding downstream 11195 50174577 ~ 50174823 (+)
G1459480 NA non-coding downstream 13310 50176692 ~ 50176955 (+)
G1459490 NA non-coding downstream 47353 50210735 ~ 50210990 (+)
G1459492 NA non-coding downstream 49849 50213231 ~ 50213462 (+)
G1458807 NA other upstream 723719 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1122692 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1441804 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1738643 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 2126465 48030892 ~ 48036585 (+)
atxn7l2a LOC106565127 other downstream 267425 50427145 ~ 50437612 (+)
G1459769 NA other downstream 613147 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 731558 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 916750 51080132 ~ 51137770 (+)

Expression



Co-expression Network