G1459478


Basic Information

Item Value
gene id G1459478
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50174577 ~ 50174823 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669728
ACTAGACATCCCTGAGCCCAGAGAAGGAGCTCCAATAACATAACATGGAGGTGGTGCGACCGCAGTCCACCCTGATGGTTGATGTAAGCCACCACTGTGGTGTTGTCCGTTCTCACCAGGACATGTCTTCCCTTCAGATGTGGAAGGAAAGACTGCAGGGCCAGTAGTATAGCTCAGAGCTCTAATGTATTGATGTGCCTTCCGCTCCAAGGGGGTAGCCAACAGCCGCTGGCCGACCTGCCCTTGG

Function

NR:

description
uncharacterized protein LOC105357907

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669728 True 247 lncRNA 0.55 1 50174577 50174823

Neighbor

gene id symbol gene type direction distance location
LOC110494954 LOC106565153 coding upstream 516610 49604663 ~ 49657967 (+)
cacna1da LOC106583449 coding upstream 580077 49478916 ~ 49594500 (+)
LOC110494034 LOC106565158 coding upstream 854960 49309152 ~ 49319617 (+)
LOC110494028 LOC106565296 coding upstream 1054160 48977901 ~ 49120417 (+)
LOC110494957 qrich1 coding downstream 6222 50181045 ~ 50192699 (+)
LOC110494976 LOC106565138 coding downstream 22280 50197103 ~ 50207320 (+)
LOC110494984 LOC106565139 coding downstream 47818 50222641 ~ 50229675 (+)
rhoa rhoa coding downstream 58824 50233647 ~ 50239667 (+)
zgc:112334 LOC106565137 coding downstream 77984 50252807 ~ 50259008 (+)
G1459476 NA non-coding upstream 1377 50172992 ~ 50173200 (+)
G1459468 NA non-coding upstream 11195 50163048 ~ 50163382 (+)
G1459463 NA non-coding upstream 16287 50158073 ~ 50158290 (+)
G1459431 NA non-coding upstream 45314 50129045 ~ 50129263 (+)
G1459162 NA non-coding upstream 53560 50112975 ~ 50121017 (+)
G1459480 NA non-coding downstream 1869 50176692 ~ 50176955 (+)
G1459490 NA non-coding downstream 35912 50210735 ~ 50210990 (+)
G1459492 NA non-coding downstream 38408 50213231 ~ 50213462 (+)
G1459493 NA non-coding downstream 38930 50213753 ~ 50213953 (+)
G1459494 NA non-coding downstream 39213 50214036 ~ 50214411 (+)
G1458807 NA other upstream 735248 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1134221 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1453333 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1750172 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 2137994 48030892 ~ 48036585 (+)
atxn7l2a LOC106565127 other downstream 255984 50427145 ~ 50437612 (+)
G1459769 NA other downstream 601706 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 720117 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 905309 51080132 ~ 51137770 (+)

Expression


Co-expression Network