G1459480


Basic Information

Item Value
gene id G1459480
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50176692 ~ 50176955 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669730
AAACAGCCTATCACTGGCCAACAGGGAACAGCTGTCATTGCCATCGAAGCTATCAACCTCCTGACGCAGGGCATGCGCCCTCCGTTCAAGGTGGTCCCAGCGGTCCGACTTCTGCCCCCGTCCAGGACTGGCAGCAGATGGGCTCTGCTCCGGCACGCTTCCTGGGAGGGGTAGTGGGCCCAGTAGAGGGACTAACAGCTCGCAGGCACACCACTCCTGAGGGAGGGAGTTCGTCCCCAGCCTGAGCCCGAGCCTGGCCGACCC

Function

NR:

description
PREDICTED: glycosyltransferase 8 domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669730 True 264 lncRNA 0.64 1 50176692 50176955

Neighbor

gene id symbol gene type direction distance location
LOC110494954 LOC106565153 coding upstream 518725 49604663 ~ 49657967 (+)
cacna1da LOC106583449 coding upstream 582192 49478916 ~ 49594500 (+)
LOC110494034 LOC106565158 coding upstream 857075 49309152 ~ 49319617 (+)
LOC110494028 LOC106565296 coding upstream 1056275 48977901 ~ 49120417 (+)
LOC110494957 qrich1 coding downstream 4090 50181045 ~ 50192699 (+)
LOC110494976 LOC106565138 coding downstream 20148 50197103 ~ 50207320 (+)
LOC110494984 LOC106565139 coding downstream 45686 50222641 ~ 50229675 (+)
rhoa rhoa coding downstream 56692 50233647 ~ 50239667 (+)
zgc:112334 LOC106565137 coding downstream 75852 50252807 ~ 50259008 (+)
G1459478 NA non-coding upstream 1869 50174577 ~ 50174823 (+)
G1459476 NA non-coding upstream 3492 50172992 ~ 50173200 (+)
G1459468 NA non-coding upstream 13310 50163048 ~ 50163382 (+)
G1459463 NA non-coding upstream 18402 50158073 ~ 50158290 (+)
G1459431 NA non-coding upstream 47429 50129045 ~ 50129263 (+)
G1459490 NA non-coding downstream 33780 50210735 ~ 50210990 (+)
G1459492 NA non-coding downstream 36276 50213231 ~ 50213462 (+)
G1459493 NA non-coding downstream 36798 50213753 ~ 50213953 (+)
G1459494 NA non-coding downstream 37081 50214036 ~ 50214411 (+)
G1459518 NA non-coding downstream 120508 50297463 ~ 50358790 (+)
G1458807 NA other upstream 737363 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1136336 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1455448 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1752287 48389082 ~ 48424478 (+)
glrx LOC106565191 other upstream 2140109 48030892 ~ 48036585 (+)
atxn7l2a LOC106565127 other downstream 253852 50427145 ~ 50437612 (+)
G1459769 NA other downstream 599574 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 717985 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 903177 51080132 ~ 51137770 (+)

Expression


Co-expression Network