G1459492


Basic Information

Item Value
gene id G1459492
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50213231 ~ 50213462 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669742
tcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctaaaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgaccagcatggtcgaataa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669742 True 232 lncRNA 0.47 1 50213231 50213462

Neighbor

gene id symbol gene type direction distance location
LOC110494976 LOC106565138 coding upstream 5911 50197103 ~ 50207320 (+)
LOC110494957 qrich1 coding upstream 20532 50181045 ~ 50192699 (+)
LOC110494954 LOC106565153 coding upstream 555264 49604663 ~ 49657967 (+)
cacna1da LOC106583449 coding upstream 618731 49478916 ~ 49594500 (+)
LOC110494034 LOC106565158 coding upstream 893614 49309152 ~ 49319617 (+)
LOC110494984 LOC106565139 coding downstream 9179 50222641 ~ 50229675 (+)
rhoa rhoa coding downstream 20185 50233647 ~ 50239667 (+)
zgc:112334 LOC106565137 coding downstream 39345 50252807 ~ 50259008 (+)
LOC110494960 nckipsd coding downstream 49885 50263347 ~ 50280709 (+)
slc25a20 slc25a20 coding downstream 69635 50283097 ~ 50289549 (+)
G1459490 NA non-coding upstream 2241 50210735 ~ 50210990 (+)
G1459480 NA non-coding upstream 36276 50176692 ~ 50176955 (+)
G1459478 NA non-coding upstream 38408 50174577 ~ 50174823 (+)
G1459476 NA non-coding upstream 40031 50172992 ~ 50173200 (+)
G1459468 NA non-coding upstream 49849 50163048 ~ 50163382 (+)
G1459493 NA non-coding downstream 291 50213753 ~ 50213953 (+)
G1459494 NA non-coding downstream 574 50214036 ~ 50214411 (+)
G1459518 NA non-coding downstream 84001 50297463 ~ 50358790 (+)
G1459510 LOC106565133 non-coding downstream 90669 50304131 ~ 50310362 (+)
G1459562 NA non-coding downstream 155587 50369049 ~ 50369289 (+)
G1458807 NA other upstream 773902 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1172875 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1491987 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1788826 48389082 ~ 48424478 (+)
atxn7l2a LOC106565127 other downstream 217345 50427145 ~ 50437612 (+)
G1459769 NA other downstream 563067 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 681478 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 866670 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3960552 54147039 ~ 54189617 (+)

Expression


Co-expression Network