G1459493


Basic Information

Item Value
gene id G1459493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50213753 ~ 50213953 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669743
gccaggtggactggggacagcaaggagtcatcatgtcaggtagtcctggggcattgtcctagggctcaggtcctccgagagagagaaaaaaagggagaaggagagaattagagaacgcacacttagattcacacaggacaccgaataggacaggagaagtactccagatataacaaactgaccctagtacctcaattggcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669743 True 201 lncRNA 0.50 1 50213753 50213953

Neighbor

gene id symbol gene type direction distance location
LOC110494976 LOC106565138 coding upstream 6433 50197103 ~ 50207320 (+)
LOC110494957 qrich1 coding upstream 21054 50181045 ~ 50192699 (+)
LOC110494954 LOC106565153 coding upstream 555786 49604663 ~ 49657967 (+)
cacna1da LOC106583449 coding upstream 619253 49478916 ~ 49594500 (+)
LOC110494034 LOC106565158 coding upstream 894136 49309152 ~ 49319617 (+)
LOC110494984 LOC106565139 coding downstream 8688 50222641 ~ 50229675 (+)
rhoa rhoa coding downstream 19694 50233647 ~ 50239667 (+)
zgc:112334 LOC106565137 coding downstream 38854 50252807 ~ 50259008 (+)
LOC110494960 nckipsd coding downstream 49394 50263347 ~ 50280709 (+)
slc25a20 slc25a20 coding downstream 69144 50283097 ~ 50289549 (+)
G1459492 NA non-coding upstream 291 50213231 ~ 50213462 (+)
G1459490 NA non-coding upstream 2763 50210735 ~ 50210990 (+)
G1459480 NA non-coding upstream 36798 50176692 ~ 50176955 (+)
G1459478 NA non-coding upstream 38930 50174577 ~ 50174823 (+)
G1459476 NA non-coding upstream 40553 50172992 ~ 50173200 (+)
G1459494 NA non-coding downstream 83 50214036 ~ 50214411 (+)
G1459518 NA non-coding downstream 83510 50297463 ~ 50358790 (+)
G1459510 LOC106565133 non-coding downstream 90178 50304131 ~ 50310362 (+)
G1459562 NA non-coding downstream 155096 50369049 ~ 50369289 (+)
G1459568 NA non-coding downstream 166821 50380774 ~ 50381005 (+)
G1458807 NA other upstream 774424 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1173397 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1492509 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1789348 48389082 ~ 48424478 (+)
atxn7l2a LOC106565127 other downstream 216854 50427145 ~ 50437612 (+)
G1459769 NA other downstream 562576 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 680987 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 866179 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3960061 54147039 ~ 54189617 (+)

Expression


Co-expression Network