Gene
RNA
| Item | Value |
|---|---|
| gene id | G1459562 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 50369049 ~ 50369289 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1669818 | True | 241 | lncRNA | 0.34 | 1 | 50369049 | 50369289 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prkar2ab | LOC106565134 | coding | upstream | 67231 | 50290278 ~ 50301818 (+) |
| slc25a20 | slc25a20 | coding | upstream | 79500 | 50283097 ~ 50289549 (+) |
| LOC110494960 | nckipsd | coding | upstream | 88340 | 50263347 ~ 50280709 (+) |
| zgc:112334 | LOC106565137 | coding | upstream | 110041 | 50252807 ~ 50259008 (+) |
| rhoa | rhoa | coding | upstream | 129382 | 50233647 ~ 50239667 (+) |
| LOC110494986 | LOC106565131 | coding | downstream | 12783 | 50382072 ~ 50386942 (+) |
| LOC110494971 | LOC106565129 | coding | downstream | 31058 | 50400347 ~ 50402864 (+) |
| sypl2a | LOC106565128 | coding | downstream | 39387 | 50408676 ~ 50422865 (+) |
| atxn7l2a | LOC106565127 | coding | downstream | 57856 | 50427145 ~ 50437612 (+) |
| LOC110494981 | LOC106565126 | coding | downstream | 69381 | 50438670 ~ 50445648 (+) |
| G1459518 | NA | non-coding | upstream | 10259 | 50297463 ~ 50358790 (+) |
| G1459510 | LOC106565133 | non-coding | upstream | 58687 | 50304131 ~ 50310362 (+) |
| G1459494 | NA | non-coding | upstream | 154638 | 50214036 ~ 50214411 (+) |
| G1459493 | NA | non-coding | upstream | 155096 | 50213753 ~ 50213953 (+) |
| G1459492 | NA | non-coding | upstream | 155587 | 50213231 ~ 50213462 (+) |
| G1459568 | NA | non-coding | downstream | 11485 | 50380774 ~ 50381005 (+) |
| G1459570 | NA | non-coding | downstream | 21978 | 50391267 ~ 50391700 (+) |
| G1459575 | NA | non-coding | downstream | 35087 | 50404376 ~ 50404630 (+) |
| G1459582 | NA | non-coding | downstream | 54526 | 50423815 ~ 50424018 (+) |
| G1459583 | NA | non-coding | downstream | 55096 | 50424385 ~ 50424786 (+) |
| LOC110494957 | qrich1 | other | upstream | 185353 | 50181045 ~ 50192699 (+) |
| G1458807 | NA | other | upstream | 929720 | 49439006 ~ 49439329 (+) |
| erc2 | LOC106583361 | other | upstream | 1328693 | 48866589 ~ 49040356 (+) |
| bsnb | LOC106565168 | other | upstream | 1647805 | 48693321 ~ 48814670 (+) |
| LOC110494013 | LOC106565177 | other | upstream | 1944644 | 48389082 ~ 48424478 (+) |
| G1459769 | NA | other | downstream | 407240 | 50776529 ~ 50777072 (+) |
| LOC110494047 | btg2 | other | downstream | 525651 | 50894903 ~ 50897444 (+) |
| G1460249 | LOC106565103 | other | downstream | 710843 | 51080132 ~ 51137770 (+) |
| G1464092 | LOC106565344 | other | downstream | 3804725 | 54147039 ~ 54189617 (+) |
