G1459582


Basic Information

Item Value
gene id G1459582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50423815 ~ 50424018 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669849
aacaagttctcatttacaattgcgacctggccaagataaagcaaagcagttcgacacacaacgacacagagttacacatggagtaaaacaaacatacagtcaataatacagtataaacaagtctatatacgatgtgagcaaatgaggtaaaggcaaaaaaaaacgccatggtggcaaagtaaatacaatatagcaagtaaaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669849 True 204 lncRNA 0.36 1 50423815 50424018

Neighbor

gene id symbol gene type direction distance location
sypl2a LOC106565128 coding upstream 950 50408676 ~ 50422865 (+)
LOC110494971 LOC106565129 coding upstream 20951 50400347 ~ 50402864 (+)
LOC110494986 LOC106565131 coding upstream 36873 50382072 ~ 50386942 (+)
prkar2ab LOC106565134 coding upstream 121997 50290278 ~ 50301818 (+)
slc25a20 slc25a20 coding upstream 134266 50283097 ~ 50289549 (+)
atxn7l2a LOC106565127 coding downstream 3127 50427145 ~ 50437612 (+)
LOC110494981 LOC106565126 coding downstream 14652 50438670 ~ 50445648 (+)
ldlrad2 LOC106565124 coding downstream 64706 50483057 ~ 50500086 (+)
LOC110494989 LOC106565121 coding downstream 86401 50510419 ~ 50543166 (+)
LOC110494982 LOC106565312 coding downstream 234023 50658041 ~ 50664680 (+)
G1459575 NA non-coding upstream 19185 50404376 ~ 50404630 (+)
G1459570 NA non-coding upstream 32115 50391267 ~ 50391700 (+)
G1459568 NA non-coding upstream 42810 50380774 ~ 50381005 (+)
G1459562 NA non-coding upstream 54526 50369049 ~ 50369289 (+)
G1459518 NA non-coding upstream 65025 50297463 ~ 50358790 (+)
G1459583 NA non-coding downstream 367 50424385 ~ 50424786 (+)
G1459618 NA non-coding downstream 28762 50452780 ~ 50453450 (+)
G1459619 NA non-coding downstream 29465 50453483 ~ 50453775 (+)
G1459620 zbtb40 non-coding downstream 30074 50454092 ~ 50454584 (+)
LOC110494957 qrich1 other upstream 240119 50181045 ~ 50192699 (+)
G1458807 NA other upstream 984486 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1383459 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1702571 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1999410 48389082 ~ 48424478 (+)
G1459769 NA other downstream 352511 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 470922 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 656114 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3749996 54147039 ~ 54189617 (+)

Expression


Co-expression Network