G1459583


Basic Information

Item Value
gene id G1459583
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50424385 ~ 50424786 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669850
ataaggggggactttacctagcagggtcttgtagatgacatggagccagtggatttggcgacgagtatgaagcgagggccagccaacgagagcgtacaggtcgcaatggtgggtagtatatggggctttggtgacaaaatggattgcactgtgatagactgcatccaatttgttgaggagggtattggaggctattttgtaaatgacatcgccaaagtcgaggattggtaggatggtcagttttacaagggtatgtttggcagcatgagtgaaggatgctttgttgcgaaataggaagccaattctagatttaactttgcattggagatgtttgatatgggtctggaaggagagtttacagtctaaccaaacacctaagtatttgtagttgtccacgtattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669850 True 402 lncRNA 0.45 1 50424385 50424786

Neighbor

gene id symbol gene type direction distance location
sypl2a LOC106565128 coding upstream 1520 50408676 ~ 50422865 (+)
LOC110494971 LOC106565129 coding upstream 21521 50400347 ~ 50402864 (+)
LOC110494986 LOC106565131 coding upstream 37443 50382072 ~ 50386942 (+)
prkar2ab LOC106565134 coding upstream 122567 50290278 ~ 50301818 (+)
slc25a20 slc25a20 coding upstream 134836 50283097 ~ 50289549 (+)
atxn7l2a LOC106565127 coding downstream 2359 50427145 ~ 50437612 (+)
LOC110494981 LOC106565126 coding downstream 13884 50438670 ~ 50445648 (+)
ldlrad2 LOC106565124 coding downstream 63938 50483057 ~ 50500086 (+)
LOC110494989 LOC106565121 coding downstream 85633 50510419 ~ 50543166 (+)
LOC110494982 LOC106565312 coding downstream 233255 50658041 ~ 50664680 (+)
G1459582 NA non-coding upstream 367 50423815 ~ 50424018 (+)
G1459575 NA non-coding upstream 19755 50404376 ~ 50404630 (+)
G1459570 NA non-coding upstream 32685 50391267 ~ 50391700 (+)
G1459568 NA non-coding upstream 43380 50380774 ~ 50381005 (+)
G1459562 NA non-coding upstream 55096 50369049 ~ 50369289 (+)
G1459618 NA non-coding downstream 27994 50452780 ~ 50453450 (+)
G1459619 NA non-coding downstream 28697 50453483 ~ 50453775 (+)
G1459620 zbtb40 non-coding downstream 29306 50454092 ~ 50454584 (+)
G1459622 NA non-coding downstream 31415 50456201 ~ 50456459 (+)
LOC110494957 qrich1 other upstream 240689 50181045 ~ 50192699 (+)
G1458807 NA other upstream 985056 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1384029 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1703141 48693321 ~ 48814670 (+)
LOC110494013 LOC106565177 other upstream 1999980 48389082 ~ 48424478 (+)
G1459769 NA other downstream 351743 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 470154 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 655346 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3749228 54147039 ~ 54189617 (+)

Expression


Co-expression Network