Gene
RNA
| Item | Value |
|---|---|
| gene id | G1459618 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 50452780 ~ 50453450 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger and BTB domain-containing protein 40 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1669887 | True | 671 | lncRNA | 0.44 | 1 | 50452780 | 50453450 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494981 | LOC106565126 | coding | upstream | 7132 | 50438670 ~ 50445648 (+) |
| atxn7l2a | LOC106565127 | coding | upstream | 15168 | 50427145 ~ 50437612 (+) |
| sypl2a | LOC106565128 | coding | upstream | 29915 | 50408676 ~ 50422865 (+) |
| LOC110494971 | LOC106565129 | coding | upstream | 49916 | 50400347 ~ 50402864 (+) |
| LOC110494986 | LOC106565131 | coding | upstream | 65838 | 50382072 ~ 50386942 (+) |
| ldlrad2 | LOC106565124 | coding | downstream | 35274 | 50483057 ~ 50500086 (+) |
| LOC110494989 | LOC106565121 | coding | downstream | 56969 | 50510419 ~ 50543166 (+) |
| LOC110494982 | LOC106565312 | coding | downstream | 204591 | 50658041 ~ 50664680 (+) |
| LOC110494953 | LOC106565294 | coding | downstream | 211728 | 50665178 ~ 50697862 (+) |
| kctd20 | LOC106565116 | coding | downstream | 248712 | 50702162 ~ 50708829 (+) |
| G1459583 | NA | non-coding | upstream | 27994 | 50424385 ~ 50424786 (+) |
| G1459582 | NA | non-coding | upstream | 28762 | 50423815 ~ 50424018 (+) |
| G1459575 | NA | non-coding | upstream | 48150 | 50404376 ~ 50404630 (+) |
| G1459570 | NA | non-coding | upstream | 61080 | 50391267 ~ 50391700 (+) |
| G1459619 | NA | non-coding | downstream | 33 | 50453483 ~ 50453775 (+) |
| G1459620 | zbtb40 | non-coding | downstream | 642 | 50454092 ~ 50454584 (+) |
| G1459622 | NA | non-coding | downstream | 2751 | 50456201 ~ 50456459 (+) |
| G1459602 | usp48 | non-coding | downstream | 9021 | 50462471 ~ 50462950 (+) |
| LOC110494957 | qrich1 | other | upstream | 269084 | 50181045 ~ 50192699 (+) |
| G1458807 | NA | other | upstream | 1013451 | 49439006 ~ 49439329 (+) |
| erc2 | LOC106583361 | other | upstream | 1412424 | 48866589 ~ 49040356 (+) |
| bsnb | LOC106565168 | other | upstream | 1731536 | 48693321 ~ 48814670 (+) |
| G1459769 | NA | other | downstream | 323079 | 50776529 ~ 50777072 (+) |
| LOC110494047 | btg2 | other | downstream | 441490 | 50894903 ~ 50897444 (+) |
| G1460249 | LOC106565103 | other | downstream | 626682 | 51080132 ~ 51137770 (+) |
| G1464092 | LOC106565344 | other | downstream | 3720564 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 3802931 | 54256327 ~ 54264616 (+) |
