G1459619


Basic Information

Item Value
gene id G1459619
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50453483 ~ 50453775 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669888
TGTATAAATAAActaaatatctgacattgtattcccatttgaactttgctgtgcttttaaaatggttgaaagcacagtgatagacatttgggtgataactaaaccaaaaatctgacattatttttccattggaatttggttgtgcttttagatggttgaaagcatagtgataacacattggaaattcaactgacttttggctgtctttttgagtgtgtGAATATAGTTGTAATCTCAGTAATCAACCTCTcgaccaaatattacccaattatccacaTTGAAATGATGTAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669888 True 293 lncRNA 0.32 1 50453483 50453775

Neighbor

gene id symbol gene type direction distance location
LOC110494981 LOC106565126 coding upstream 7835 50438670 ~ 50445648 (+)
atxn7l2a LOC106565127 coding upstream 15871 50427145 ~ 50437612 (+)
sypl2a LOC106565128 coding upstream 30618 50408676 ~ 50422865 (+)
LOC110494971 LOC106565129 coding upstream 50619 50400347 ~ 50402864 (+)
LOC110494986 LOC106565131 coding upstream 66541 50382072 ~ 50386942 (+)
ldlrad2 LOC106565124 coding downstream 34949 50483057 ~ 50500086 (+)
LOC110494989 LOC106565121 coding downstream 56644 50510419 ~ 50543166 (+)
LOC110494982 LOC106565312 coding downstream 204266 50658041 ~ 50664680 (+)
LOC110494953 LOC106565294 coding downstream 211403 50665178 ~ 50697862 (+)
kctd20 LOC106565116 coding downstream 248387 50702162 ~ 50708829 (+)
G1459618 NA non-coding upstream 33 50452780 ~ 50453450 (+)
G1459583 NA non-coding upstream 28697 50424385 ~ 50424786 (+)
G1459582 NA non-coding upstream 29465 50423815 ~ 50424018 (+)
G1459575 NA non-coding upstream 48853 50404376 ~ 50404630 (+)
G1459620 zbtb40 non-coding downstream 317 50454092 ~ 50454584 (+)
G1459622 NA non-coding downstream 2426 50456201 ~ 50456459 (+)
G1459602 usp48 non-coding downstream 8696 50462471 ~ 50462950 (+)
G1459640 NA non-coding downstream 42223 50495998 ~ 50496367 (+)
LOC110494957 qrich1 other upstream 269787 50181045 ~ 50192699 (+)
G1458807 NA other upstream 1014154 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1413127 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1732239 48693321 ~ 48814670 (+)
G1459769 NA other downstream 322754 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 441165 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 626357 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3720239 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 3802606 54256327 ~ 54264616 (+)

Expression


Co-expression Network