Gene
RNA
| Item | Value |
|---|---|
| gene id | G1459995 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 50491912 ~ 50492210 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| low-density lipoprotein receptor class A domain-containing protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1670356 | True | 299 | lncRNA | 0.45 | 1 | 50491912 | 50492210 |
50,489,600
50,490,000
50,490,400
50,490,800
50,491,200
50,491,600
50,492,000
50,492,400
50,492,800
50,493,200
50,493,600
50,494,000
NC_048581.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| usp48 | LOC106565123 | coding | downstream | 7979 | 50459542 ~ 50483933 (-) |
| zbtb40 | zbtb40 | coding | downstream | 36182 | 50445805 ~ 50455730 (-) |
| fbxo42 | LOC106565130 | coding | downstream | 111507 | 50364407 ~ 50380405 (-) |
| slc25a34 | LOC106565132 | coding | downstream | 128828 | 50349819 ~ 50363084 (-) |
| fblim1 | fbli1 | coding | downstream | 145773 | 50336611 ~ 50346335 (-) |
| LOC110494987 | LOC106565122 | coding | upstream | 14435 | 50506645 ~ 50507861 (-) |
| LOC110493202 | LOC106565118 | coding | upstream | 51577 | 50543787 ~ 50556328 (-) |
| LOC110494979 | LOC106565119 | coding | upstream | 67062 | 50559272 ~ 50577517 (-) |
| LOC110494983 | rl10a | coding | upstream | 85805 | 50578015 ~ 50580624 (-) |
| LOC110494977 | LOC100136526 | coding | upstream | 98237 | 50590447 ~ 50629054 (-) |
| G1459963 | NA | non-coding | downstream | 66509 | 50425170 ~ 50425403 (-) |
| G1459953 | NA | non-coding | downstream | 87461 | 50404180 ~ 50404451 (-) |
| G1459952 | NA | non-coding | downstream | 87873 | 50403543 ~ 50404039 (-) |
| G1459944 | NA | non-coding | downstream | 99086 | 50392600 ~ 50392826 (-) |
| G1459943 | NA | non-coding | downstream | 100125 | 50391365 ~ 50391787 (-) |
| G1460033 | NA | non-coding | upstream | 61861 | 50554071 ~ 50561164 (-) |
| G1460034 | NA | non-coding | upstream | 62821 | 50555031 ~ 50562145 (-) |
| G1460039 | NA | non-coding | upstream | 82385 | 50574595 ~ 50574882 (-) |
| G1460040 | NA | non-coding | upstream | 82716 | 50574926 ~ 50575127 (-) |
| G1460106 | NA | non-coding | upstream | 196089 | 50688299 ~ 50688700 (-) |
| LOC118940151 | NA | other | downstream | 317319 | 50173658 ~ 50178053 (-) |
| G1459325 | LOC106565145 | other | downstream | 456400 | 49991563 ~ 50035512 (-) |
| LOC110494969 | LOC106584726 | other | downstream | 533649 | 49953456 ~ 49964331 (-) |
| G1459333 | LOC106584726 | other | downstream | 725843 | 49727352 ~ 49766069 (-) |
| G1460128 | NA | other | upstream | 262724 | 50754934 ~ 50760996 (-) |
| LOC110494046 | LOC106565111 | other | upstream | 375017 | 50862652 ~ 50875481 (-) |
| G1460539 | NA | other | upstream | 506544 | 50998754 ~ 50999404 (-) |
| LOC110494054 | LOC106565105 | other | upstream | 571034 | 51063244 ~ 51077345 (-) |
| G1461521 | NA | other | upstream | 1254706 | 51746916 ~ 51761022 (-) |
