G1459640


Basic Information

Item Value
gene id G1459640
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50495998 ~ 50496367 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1669909
tggacacgtactggcgacaccgtgcgcttaaccgcataacacggtgcctgcccagtatcgcgctgcttataataagcacgaggggtgagcgcaggtctgctacctggcttagctccacccctcgtgtgccccccccaaaaaaaattttggggctgtctctcgtacctgtcgcactgccgtgctgcctcctcatatcgccgccgctcagctttcgctgcctccagctctgctttggggcggcgatattccccagcctgtgcccagggtccctctccgttcagtatctcctcccatgtccaggagtcctgtgataccggccgctgttgttgttgctgctgctgctgctgtcgtcgctgttttctaccacgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1669909 True 370 lncRNA 0.60 1 50495998 50496367

Neighbor

gene id symbol gene type direction distance location
LOC110494981 LOC106565126 coding upstream 50350 50438670 ~ 50445648 (+)
atxn7l2a LOC106565127 coding upstream 58386 50427145 ~ 50437612 (+)
sypl2a LOC106565128 coding upstream 73133 50408676 ~ 50422865 (+)
LOC110494971 LOC106565129 coding upstream 93134 50400347 ~ 50402864 (+)
LOC110494986 LOC106565131 coding upstream 109056 50382072 ~ 50386942 (+)
LOC110494989 LOC106565121 coding downstream 14052 50510419 ~ 50543166 (+)
LOC110494982 LOC106565312 coding downstream 161674 50658041 ~ 50664680 (+)
LOC110494953 LOC106565294 coding downstream 168811 50665178 ~ 50697862 (+)
kctd20 LOC106565116 coding downstream 205795 50702162 ~ 50708829 (+)
LOC110494040 cept1 coding downstream 232674 50729041 ~ 50748688 (+)
ldlrad2 LOC106565124 non-coding upstream 4803 50483057 ~ 50500086 (+)
G1459602 usp48 non-coding upstream 33048 50462471 ~ 50462950 (+)
G1459622 NA non-coding upstream 39539 50456201 ~ 50456459 (+)
G1459620 zbtb40 non-coding upstream 41414 50454092 ~ 50454584 (+)
G1459619 NA non-coding upstream 42223 50453483 ~ 50453775 (+)
G1459592 NA non-coding downstream 6599 50502966 ~ 50504128 (+)
G1459600 NA non-coding downstream 7899 50504266 ~ 50504512 (+)
G1459656 NA non-coding downstream 47487 50543854 ~ 50544820 (+)
G1459673 NA non-coding downstream 72883 50569250 ~ 50573859 (+)
G1459679 NA non-coding downstream 79489 50575856 ~ 50576144 (+)
LOC110494957 qrich1 other upstream 312302 50181045 ~ 50192699 (+)
G1458807 NA other upstream 1056669 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1455642 48866589 ~ 49040356 (+)
bsnb LOC106565168 other upstream 1774754 48693321 ~ 48814670 (+)
G1459769 NA other downstream 280162 50776529 ~ 50777072 (+)
LOC110494047 btg2 other downstream 398573 50894903 ~ 50897444 (+)
G1460249 LOC106565103 other downstream 583765 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3677647 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 3760014 54256327 ~ 54264616 (+)

Expression


Co-expression Network