Gene
RNA
| Item | Value |
|---|---|
| gene id | G1459693 |
| gene name | LOC106565117 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 50644899 ~ 50650247 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| differentially expressed in FDCP 6 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1669970 | True | 797 | lncRNA | 0.50 | 4 | 50644899 | 50650247 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494989 | LOC106565121 | coding | upstream | 101733 | 50510419 ~ 50543166 (+) |
| ldlrad2 | LOC106565124 | coding | upstream | 144813 | 50483057 ~ 50500086 (+) |
| LOC110494981 | LOC106565126 | coding | upstream | 199251 | 50438670 ~ 50445648 (+) |
| atxn7l2a | LOC106565127 | coding | upstream | 207287 | 50427145 ~ 50437612 (+) |
| sypl2a | LOC106565128 | coding | upstream | 222034 | 50408676 ~ 50422865 (+) |
| LOC110494982 | LOC106565312 | coding | downstream | 7794 | 50658041 ~ 50664680 (+) |
| LOC110494953 | LOC106565294 | coding | downstream | 14931 | 50665178 ~ 50697862 (+) |
| kctd20 | LOC106565116 | coding | downstream | 51915 | 50702162 ~ 50708829 (+) |
| LOC110494040 | cept1 | coding | downstream | 78794 | 50729041 ~ 50748688 (+) |
| trnaa-ugc-133 | NA | coding | downstream | 90361 | 50740608 ~ 50740681 (+) |
| G1459595 | NA | non-coding | upstream | 12529 | 50585636 ~ 50632370 (+) |
| G1459681 | NA | non-coding | upstream | 62408 | 50582195 ~ 50582491 (+) |
| G1459666 | rl10a | non-coding | upstream | 66230 | 50578017 ~ 50578669 (+) |
| G1459679 | NA | non-coding | upstream | 68755 | 50575856 ~ 50576144 (+) |
| G1459673 | NA | non-coding | upstream | 71040 | 50569250 ~ 50573859 (+) |
| G1459724 | NA | non-coding | downstream | 58688 | 50708935 ~ 50711323 (+) |
| G1459756 | NA | non-coding | downstream | 110785 | 50761032 ~ 50761269 (+) |
| G1459764 | NA | non-coding | downstream | 120798 | 50771045 ~ 50771281 (+) |
| G1459771 | NA | non-coding | downstream | 127512 | 50777759 ~ 50778334 (+) |
| G1459792 | NA | non-coding | downstream | 160555 | 50810802 ~ 50811017 (+) |
| LOC110494957 | qrich1 | other | upstream | 461203 | 50181045 ~ 50192699 (+) |
| G1458807 | NA | other | upstream | 1205570 | 49439006 ~ 49439329 (+) |
| erc2 | LOC106583361 | other | upstream | 1604543 | 48866589 ~ 49040356 (+) |
| bsnb | LOC106565168 | other | upstream | 1923655 | 48693321 ~ 48814670 (+) |
| G1459769 | NA | other | downstream | 126282 | 50776529 ~ 50777072 (+) |
| LOC110494047 | btg2 | other | downstream | 244693 | 50894903 ~ 50897444 (+) |
| G1460249 | LOC106565103 | other | downstream | 429885 | 51080132 ~ 51137770 (+) |
| G1464092 | LOC106565344 | other | downstream | 3523767 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 3606134 | 54256327 ~ 54264616 (+) |
