G1459771


Basic Information

Item Value
gene id G1459771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50777759 ~ 50778334 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1670067
CACCAAATGGGAACTACAAATGTGGCTCATGCACACAGTGCAATAGCACTATAAAAAAAGTATTTCTTCAGACACCCACATGCAGGTCGAAAGATCCCTGTTAGGGGTATCATCTCATGCAAGACCAAGGGAGTAATCTATCTCATCACCTGTTCATGTGGAAAAGCCTACGTaggacaaacaaaaagacaattaaaacaacacatagctgaacaccgcagctcaatcaggtgtaaGAACATTGACTATCCAGTAGCAGCTCATTCTGTTGAAGGTAAccatcccatctcctccctcaaatacacaagcattgagcatgttgctctaccaaggagGGGAGGTAACATCGAGATCCTACTACTACAAAGGGAGGCTTACTAGATATCCTatctaaaaacattgacccctagtggtctgaatattgacttttATCTCAGGCCCTTATGGACAAATGTTCCTTCATGAGCAAGTCTTATAAATTGAACAACTATTTTTTTCAGCTTATTATCGTACACCTaatatgttccccctgttgatgCCCATTATATATTAaggttgaaccaaaagattacatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1670067 True 576 lncRNA 0.40 1 50777759 50778334

Neighbor

gene id symbol gene type direction distance location
dram2b tmm77 coding upstream 19014 50753871 ~ 50758745 (+)
LOC110494040 cept1 coding upstream 29071 50729041 ~ 50748688 (+)
trnaa-ugc-133 NA coding upstream 37078 50740608 ~ 50740681 (+)
kctd20 LOC106565116 coding upstream 68930 50702162 ~ 50708829 (+)
LOC110494953 LOC106565294 coding upstream 79897 50665178 ~ 50697862 (+)
LOC118936400 NA coding downstream 38088 50816422 ~ 50819052 (+)
LOC110493204 NA coding downstream 47129 50825463 ~ 50829199 (+)
LOC110494043 LOC106565114 coding downstream 58681 50837015 ~ 50840404 (+)
rbbp5 LOC106565113 coding downstream 74273 50852607 ~ 50861098 (+)
LOC110494047 btg2 coding downstream 116569 50894903 ~ 50897444 (+)
G1459764 NA non-coding upstream 6478 50771045 ~ 50771281 (+)
G1459756 NA non-coding upstream 16490 50761032 ~ 50761269 (+)
G1459724 NA non-coding upstream 66436 50708935 ~ 50711323 (+)
G1459693 LOC106565117 non-coding upstream 127512 50644899 ~ 50650247 (+)
G1459595 NA non-coding upstream 145389 50585636 ~ 50632370 (+)
G1459792 NA non-coding downstream 32468 50810802 ~ 50811017 (+)
G1459793 NA non-coding downstream 34170 50812504 ~ 50812726 (+)
G1459795 NA non-coding downstream 36379 50814713 ~ 50815038 (+)
G1459797 NA non-coding downstream 37323 50815657 ~ 50815882 (+)
G1459815 LOC106565111 non-coding downstream 84334 50862668 ~ 50866685 (+)
G1459769 NA other upstream 687 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 342053 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 594063 50181045 ~ 50192699 (+)
G1458807 NA other upstream 1338430 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1737403 48866589 ~ 49040356 (+)
G1460249 LOC106565103 other downstream 301798 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3395680 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 3478047 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 3693371 54471705 ~ 54474472 (+)

Expression


Co-expression Network