G1459792


Basic Information

Item Value
gene id G1459792
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50810802 ~ 50811017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1670088
GCATACAACAGTCAACAAGTAGCCTAGGCTATGTTTCTCATGTTCCTGGCtgaattttttgtgtgttcaggtCTCCCTCCAATCATCATTTTCTAGTCATGCTAATGGGTCAAAGACTGTAAATTAATTTCATAGCAGCAAGGGCGAATAGGGTCATCTTGAGACTTTTTAGAGCAATTGTTCCCCCTGGTGGAAAATATGAGGATATATGATAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1670088 True 216 lncRNA 0.40 1 50810802 50811017

Neighbor

gene id symbol gene type direction distance location
dram2b tmm77 coding upstream 52057 50753871 ~ 50758745 (+)
LOC110494040 cept1 coding upstream 62114 50729041 ~ 50748688 (+)
trnaa-ugc-133 NA coding upstream 70121 50740608 ~ 50740681 (+)
kctd20 LOC106565116 coding upstream 101973 50702162 ~ 50708829 (+)
LOC110494953 LOC106565294 coding upstream 112940 50665178 ~ 50697862 (+)
LOC118936400 NA coding downstream 5405 50816422 ~ 50819052 (+)
LOC110493204 NA coding downstream 14446 50825463 ~ 50829199 (+)
LOC110494043 LOC106565114 coding downstream 25998 50837015 ~ 50840404 (+)
rbbp5 LOC106565113 coding downstream 41590 50852607 ~ 50861098 (+)
LOC110494047 btg2 coding downstream 83886 50894903 ~ 50897444 (+)
G1459771 NA non-coding upstream 32468 50777759 ~ 50778334 (+)
G1459764 NA non-coding upstream 39521 50771045 ~ 50771281 (+)
G1459756 NA non-coding upstream 49533 50761032 ~ 50761269 (+)
G1459724 NA non-coding upstream 99479 50708935 ~ 50711323 (+)
G1459693 LOC106565117 non-coding upstream 160555 50644899 ~ 50650247 (+)
G1459793 NA non-coding downstream 1487 50812504 ~ 50812726 (+)
G1459795 NA non-coding downstream 3696 50814713 ~ 50815038 (+)
G1459797 NA non-coding downstream 4640 50815657 ~ 50815882 (+)
G1459815 LOC106565111 non-coding downstream 51651 50862668 ~ 50866685 (+)
G1459816 LOC106565111 non-coding downstream 55869 50866886 ~ 50867160 (+)
G1459769 NA other upstream 33730 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 375096 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 627106 50181045 ~ 50192699 (+)
G1458807 NA other upstream 1371473 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1770446 48866589 ~ 49040356 (+)
G1460249 LOC106565103 other downstream 269115 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3362997 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 3445364 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 3660688 54471705 ~ 54474472 (+)

Expression


Co-expression Network