Gene
RNA
| Item | Value |
|---|---|
| gene id | G1460176 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 50885547 ~ 50885768 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1670560 | True | 222 | lncRNA | 0.43 | 1 | 50885547 | 50885768 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rbbp5 | LOC106565113 | coding | upstream | 24449 | 50852607 ~ 50861098 (+) |
| LOC110494043 | LOC106565114 | coding | upstream | 45143 | 50837015 ~ 50840404 (+) |
| LOC110493204 | NA | coding | upstream | 56348 | 50825463 ~ 50829199 (+) |
| LOC118936400 | NA | coding | upstream | 66495 | 50816422 ~ 50819052 (+) |
| dram2b | tmm77 | coding | upstream | 126802 | 50753871 ~ 50758745 (+) |
| LOC110494047 | btg2 | coding | downstream | 9135 | 50894903 ~ 50897444 (+) |
| apobec2a | LOC100196684 | coding | downstream | 166914 | 51052682 ~ 51062761 (+) |
| csf1 | csf1 | coding | downstream | 715665 | 51601433 ~ 51640412 (+) |
| LOC110494059 | nfasc | coding | downstream | 1081271 | 51967039 ~ 52121978 (+) |
| LOC110494060 | LOC106565094 | coding | downstream | 1304831 | 52190599 ~ 52273991 (+) |
| G1459816 | LOC106565111 | non-coding | upstream | 18387 | 50866886 ~ 50867160 (+) |
| G1459815 | LOC106565111 | non-coding | upstream | 18862 | 50862668 ~ 50866685 (+) |
| G1459797 | NA | non-coding | upstream | 69665 | 50815657 ~ 50815882 (+) |
| G1459795 | NA | non-coding | upstream | 70509 | 50814713 ~ 50815038 (+) |
| G1459793 | NA | non-coding | upstream | 72821 | 50812504 ~ 50812726 (+) |
| G1460177 | NA | non-coding | downstream | 457 | 50886225 ~ 50886556 (+) |
| G1460190 | NA | non-coding | downstream | 20975 | 50906743 ~ 50906946 (+) |
| G1460205 | NA | non-coding | downstream | 41784 | 50927552 ~ 50928158 (+) |
| G1460203 | NA | non-coding | downstream | 44270 | 50930038 ~ 50931328 (+) |
| G1460202 | NA | non-coding | downstream | 45674 | 50931442 ~ 50933523 (+) |
| G1459769 | NA | other | upstream | 108475 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 449841 | 50427145 ~ 50437612 (+) |
| LOC110494957 | qrich1 | other | upstream | 701851 | 50181045 ~ 50192699 (+) |
| G1458807 | NA | other | upstream | 1446218 | 49439006 ~ 49439329 (+) |
| erc2 | LOC106583361 | other | upstream | 1845191 | 48866589 ~ 49040356 (+) |
| G1460249 | LOC106565103 | other | downstream | 194364 | 51080132 ~ 51137770 (+) |
| G1464092 | LOC106565344 | other | downstream | 3288246 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 3370613 | 54256327 ~ 54264616 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 3585937 | 54471705 ~ 54474472 (+) |
