G1460205


Basic Information

Item Value
gene id G1460205
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50927552 ~ 50928158 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1670589
tgttaacaaacctccaaacgagcttcaatgccatacaactctccttccgtggcctccaactgctcttaagtgcaagtaaaactaaatgcatgctcttcaaccgatcgctgcacgcacctgcccgcccgtctagcatcactactctggacggttctgatttagaatatgtggacaactacaaatacctaggtgtctggttagactgtaaactctccttccagactcacattaagcatctcacatttccaatccaaaattaaatctagaatcggcttcctatttcgcaacaaagcctccttcactcatgctgccaaacataccctcgtaaaactgactatcctaccgatcctcgactttggcgatgtcatttacaaaatagcctcaaacactctactcagcaaattggatgtcgtctatcacagtgccatcagtttagtcaccaaagccccatataccacccaccattgcgacctgtatgctctcgttggctggccctcgattcatattcgtcgccaaacccactggctccaggtaatctataagtctttgctaggtaaatcttcgctttatctcagctcactggtcaccatagcagcacccactcgta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1670589 True 607 lncRNA 0.46 1 50927552 50928158

Neighbor

gene id symbol gene type direction distance location
LOC110494047 btg2 coding upstream 30108 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 66454 50852607 ~ 50861098 (+)
LOC110494043 LOC106565114 coding upstream 87148 50837015 ~ 50840404 (+)
LOC110493204 NA coding upstream 98353 50825463 ~ 50829199 (+)
LOC118936400 NA coding upstream 108500 50816422 ~ 50819052 (+)
apobec2a LOC100196684 coding downstream 124524 51052682 ~ 51062761 (+)
csf1 csf1 coding downstream 673275 51601433 ~ 51640412 (+)
LOC110494059 nfasc coding downstream 1038881 51967039 ~ 52121978 (+)
LOC110494060 LOC106565094 coding downstream 1262441 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 1346096 52274254 ~ 52280244 (+)
G1460190 NA non-coding upstream 20606 50906743 ~ 50906946 (+)
G1460177 NA non-coding upstream 40996 50886225 ~ 50886556 (+)
G1460176 NA non-coding upstream 41784 50885547 ~ 50885768 (+)
G1459816 LOC106565111 non-coding upstream 60392 50866886 ~ 50867160 (+)
G1459815 LOC106565111 non-coding upstream 60867 50862668 ~ 50866685 (+)
G1460203 NA non-coding downstream 1880 50930038 ~ 50931328 (+)
G1460202 NA non-coding downstream 3284 50931442 ~ 50933523 (+)
G1460201 NA non-coding downstream 12600 50940758 ~ 50941260 (+)
G1460171 NA non-coding downstream 18620 50946778 ~ 50950543 (+)
G1460215 NA non-coding downstream 31958 50960116 ~ 50960438 (+)
G1459769 NA other upstream 150480 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 491846 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 743856 50181045 ~ 50192699 (+)
G1458807 NA other upstream 1488223 49439006 ~ 49439329 (+)
G1460249 LOC106565103 other downstream 151974 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3245856 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 3328223 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 3543547 54471705 ~ 54474472 (+)
G1466124 NA other downstream 5068490 55996648 ~ 55998347 (+)

Expression


Co-expression Network