Gene
RNA
| Item | Value |
|---|---|
| gene id | G1460203 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 50930038 ~ 50931328 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1670587 | True | 1180 | lncRNA | 0.38 | 2 | 50930038 | 50931328 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494047 | btg2 | coding | upstream | 32594 | 50894903 ~ 50897444 (+) |
| rbbp5 | LOC106565113 | coding | upstream | 68940 | 50852607 ~ 50861098 (+) |
| LOC110494043 | LOC106565114 | coding | upstream | 89634 | 50837015 ~ 50840404 (+) |
| LOC110493204 | NA | coding | upstream | 100839 | 50825463 ~ 50829199 (+) |
| LOC118936400 | NA | coding | upstream | 110986 | 50816422 ~ 50819052 (+) |
| apobec2a | LOC100196684 | coding | downstream | 121354 | 51052682 ~ 51062761 (+) |
| csf1 | csf1 | coding | downstream | 670105 | 51601433 ~ 51640412 (+) |
| LOC110494059 | nfasc | coding | downstream | 1035711 | 51967039 ~ 52121978 (+) |
| LOC110494060 | LOC106565094 | coding | downstream | 1259271 | 52190599 ~ 52273991 (+) |
| LOC110494061 | LOC106565309 | coding | downstream | 1342926 | 52274254 ~ 52280244 (+) |
| G1460205 | NA | non-coding | upstream | 1880 | 50927552 ~ 50928158 (+) |
| G1460190 | NA | non-coding | upstream | 23092 | 50906743 ~ 50906946 (+) |
| G1460177 | NA | non-coding | upstream | 43482 | 50886225 ~ 50886556 (+) |
| G1460176 | NA | non-coding | upstream | 44270 | 50885547 ~ 50885768 (+) |
| G1459816 | LOC106565111 | non-coding | upstream | 62878 | 50866886 ~ 50867160 (+) |
| G1460202 | NA | non-coding | downstream | 114 | 50931442 ~ 50933523 (+) |
| G1460201 | NA | non-coding | downstream | 9430 | 50940758 ~ 50941260 (+) |
| G1460171 | NA | non-coding | downstream | 15450 | 50946778 ~ 50950543 (+) |
| G1460215 | NA | non-coding | downstream | 28788 | 50960116 ~ 50960438 (+) |
| G1460214 | NA | non-coding | downstream | 29463 | 50960791 ~ 50961101 (+) |
| G1459769 | NA | other | upstream | 152966 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 494332 | 50427145 ~ 50437612 (+) |
| LOC110494957 | qrich1 | other | upstream | 746342 | 50181045 ~ 50192699 (+) |
| G1458807 | NA | other | upstream | 1490709 | 49439006 ~ 49439329 (+) |
| G1460249 | LOC106565103 | other | downstream | 148804 | 51080132 ~ 51137770 (+) |
| G1464092 | LOC106565344 | other | downstream | 3242686 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 3325053 | 54256327 ~ 54264616 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 3540377 | 54471705 ~ 54474472 (+) |
| G1466124 | NA | other | downstream | 5065320 | 55996648 ~ 55998347 (+) |
