G1460202


Basic Information

Item Value
gene id G1460202
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50931442 ~ 50933523 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1670586
AATCCTCAGAGTTCATTCAAAGGAGGGAATTAGACATGTGTACTACCAAAAGAACAGATGCATTCATAGTATGTATTATGCAATATGGCAGTAGTACATGCCAATGCATCCACAGTCATGAAGAGATGACAATAACAACCACTTAATAGCTTAGGTTCCAGTACATGGACATCATTTGAACTTGAATAGAACCGGATCAAATCTCTGAACATCGATAGTCCATGTCGCTATTCACATAATAATAAGGAATTCCCCCCAACCATGCCCACAAATTGGGGAAAACAAAACGTATTTCCCATTGACCCCCAGTGTAAAAGAGCCAACTTTGTTATCAATTTTTTTGGTaaacagaaataacaaaacatagagAAAATCTGCTGTGTTGCTCAATGTACATGTAACCAGGTCAAAAATCACGACCAGCGGTTCCAAATGCTCCCACACAGGGAAATGGAGCCtgcgagaagagccctgtggctttAGGCTATTCTCGGCGTGGGAGATGCGGGGACCTGGTGTCCAAGTAGGCTAAAAGGTATctgtgtgtggaaaacatttaatcatcggtaagacatttaacttgtttagtaTAGTCCGTTTGTAACGCCACTCActacttttttgtttgttttgtcttgtttgtcttggctagcttaatgttccGGTCGGTAGCCGGTAGCACTCACTCAGCTGCTAGCACCATCATGTAAAGGCGCATGAGGGAAGCCCTagaatatttgtttttttttctaagtagtgagaaGGCGAGCAATGTTGAAACAACAATAAAATtgcattttaaaaatgttttggcTCTGAACCAatggggtaacctaggtaacTACAGGCTGTTTTCCCCATAAGCGGCAGGGCCGCAAAGTTTTATCTAATAATGACTGGGACTATAGCGTTAgtgacaaaacaacaaacactgtgACATCACTAAAACAAACTCTGGCTTGTTAGTGCTCACGCGGGAGACTGGATGACAGGGGAAAAAAGcattgacaaaacaaaaacagttagTGAAAAGAACCTTAAGAAATAGCATTTCAGTCTTTCTGAAATTATGGCACAAGCACttatcatcaactatatattAAATACAATATCTGCACTTTCAGTAATCAAATGCAATTCCCTAAACTGACAAATCAATTTCATACATCCTCCTAACCAACTGTCATTGTTACACTAGCAGCGACATGTTGAACTTAGGTGATGAATACGGTCCGGTATAAGAGTGAGTAGATGAAGGGAGGGCAGAGCCACAAAACTGTCCCATTTTTCCTGTTGTGGCGGTGTGATTTGATCACAACTAAAAAACATAACCAAAACAATCTTGAACATTCCAACTGAACAAAACAGAGGCAACACCTTCTGATGTTCAAAAAAATTAAATCAGTCACTCTCTCCATTTTTCCTCTGAGGCAAACGGTCCGAGTTTGAGAACATTCCAGCCTCTTCCTCATCGAGACACACACCTCCAAGCCTGAGAGTGGTCGTTCCCTGCTTACAACCATCCTGTTGTCTTAAATCTGCAAAGGGATATCAACAAAGAGGCACAAGTAGGTCCAATCACACTCGGACTCTACAGGAAGTGATACTCAGCCAGTATGCAGATGTCAAGACCGGAATGGAGTTTCAAGAGTTCTGTATGACAGAacccttcactctctccctccgtcttCCTCCCATTCGGTTGtgcctctcctccctcagaaAGTGGAGCCGTCACAAACTATGTTTTGGTCTCGGCCGGGGAACAGCTCCATCTGCCAGTAAAGCGGGTCAGCG

Function

NR:

description
PREDICTED: bombesin receptor-activated protein C6orf89 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1670586 True 1797 lncRNA 0.42 3 50931442 50933523

Neighbor

gene id symbol gene type direction distance location
LOC110494047 btg2 coding upstream 33998 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 70344 50852607 ~ 50861098 (+)
LOC110494043 LOC106565114 coding upstream 91038 50837015 ~ 50840404 (+)
LOC110493204 NA coding upstream 102243 50825463 ~ 50829199 (+)
LOC118936400 NA coding upstream 112390 50816422 ~ 50819052 (+)
apobec2a LOC100196684 coding downstream 119159 51052682 ~ 51062761 (+)
csf1 csf1 coding downstream 667910 51601433 ~ 51640412 (+)
LOC110494059 nfasc coding downstream 1033516 51967039 ~ 52121978 (+)
LOC110494060 LOC106565094 coding downstream 1257076 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 1340731 52274254 ~ 52280244 (+)
G1460203 NA non-coding upstream 114 50930038 ~ 50931328 (+)
G1460205 NA non-coding upstream 3284 50927552 ~ 50928158 (+)
G1460190 NA non-coding upstream 24496 50906743 ~ 50906946 (+)
G1460177 NA non-coding upstream 44886 50886225 ~ 50886556 (+)
G1460176 NA non-coding upstream 45674 50885547 ~ 50885768 (+)
G1460201 NA non-coding downstream 7235 50940758 ~ 50941260 (+)
G1460171 NA non-coding downstream 13255 50946778 ~ 50950543 (+)
G1460215 NA non-coding downstream 26593 50960116 ~ 50960438 (+)
G1460214 NA non-coding downstream 27268 50960791 ~ 50961101 (+)
G1460219 NA non-coding downstream 39015 50972538 ~ 50972851 (+)
G1459769 NA other upstream 154370 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 495736 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 747746 50181045 ~ 50192699 (+)
G1458807 NA other upstream 1492113 49439006 ~ 49439329 (+)
G1460249 LOC106565103 other downstream 146609 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3240491 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 3322858 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 3538182 54471705 ~ 54474472 (+)
G1466124 NA other downstream 5063125 55996648 ~ 55998347 (+)

Expression


Co-expression Network