Gene
RNA
| Item | Value |
|---|---|
| gene id | G1460202 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 50931442 ~ 50933523 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: bombesin receptor-activated protein C6orf89 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1670586 | True | 1797 | lncRNA | 0.42 | 3 | 50931442 | 50933523 |
50,926,800
50,927,200
50,927,600
50,928,000
50,928,400
50,928,800
50,929,200
50,929,600
50,930,000
50,930,400
50,930,800
50,931,200
50,931,600
50,932,000
50,932,400
50,932,800
50,933,200
50,933,600
50,934,000
50,934,400
50,934,800
NC_048581.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494047 | btg2 | coding | upstream | 33998 | 50894903 ~ 50897444 (+) |
| rbbp5 | LOC106565113 | coding | upstream | 70344 | 50852607 ~ 50861098 (+) |
| LOC110494043 | LOC106565114 | coding | upstream | 91038 | 50837015 ~ 50840404 (+) |
| LOC110493204 | NA | coding | upstream | 102243 | 50825463 ~ 50829199 (+) |
| LOC118936400 | NA | coding | upstream | 112390 | 50816422 ~ 50819052 (+) |
| apobec2a | LOC100196684 | coding | downstream | 119159 | 51052682 ~ 51062761 (+) |
| csf1 | csf1 | coding | downstream | 667910 | 51601433 ~ 51640412 (+) |
| LOC110494059 | nfasc | coding | downstream | 1033516 | 51967039 ~ 52121978 (+) |
| LOC110494060 | LOC106565094 | coding | downstream | 1257076 | 52190599 ~ 52273991 (+) |
| LOC110494061 | LOC106565309 | coding | downstream | 1340731 | 52274254 ~ 52280244 (+) |
| G1460203 | NA | non-coding | upstream | 114 | 50930038 ~ 50931328 (+) |
| G1460205 | NA | non-coding | upstream | 3284 | 50927552 ~ 50928158 (+) |
| G1460190 | NA | non-coding | upstream | 24496 | 50906743 ~ 50906946 (+) |
| G1460177 | NA | non-coding | upstream | 44886 | 50886225 ~ 50886556 (+) |
| G1460176 | NA | non-coding | upstream | 45674 | 50885547 ~ 50885768 (+) |
| G1460201 | NA | non-coding | downstream | 7235 | 50940758 ~ 50941260 (+) |
| G1460171 | NA | non-coding | downstream | 13255 | 50946778 ~ 50950543 (+) |
| G1460215 | NA | non-coding | downstream | 26593 | 50960116 ~ 50960438 (+) |
| G1460214 | NA | non-coding | downstream | 27268 | 50960791 ~ 50961101 (+) |
| G1460219 | NA | non-coding | downstream | 39015 | 50972538 ~ 50972851 (+) |
| G1459769 | NA | other | upstream | 154370 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 495736 | 50427145 ~ 50437612 (+) |
| LOC110494957 | qrich1 | other | upstream | 747746 | 50181045 ~ 50192699 (+) |
| G1458807 | NA | other | upstream | 1492113 | 49439006 ~ 49439329 (+) |
| G1460249 | LOC106565103 | other | downstream | 146609 | 51080132 ~ 51137770 (+) |
| G1464092 | LOC106565344 | other | downstream | 3240491 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 3322858 | 54256327 ~ 54264616 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 3538182 | 54471705 ~ 54474472 (+) |
| G1466124 | NA | other | downstream | 5063125 | 55996648 ~ 55998347 (+) |
