Gene
RNA
| Item | Value |
|---|---|
| gene id | G1460214 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 50960791 ~ 50961101 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1670607 | True | 311 | lncRNA | 0.38 | 1 | 50960791 | 50961101 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494047 | btg2 | coding | upstream | 63347 | 50894903 ~ 50897444 (+) |
| rbbp5 | LOC106565113 | coding | upstream | 99693 | 50852607 ~ 50861098 (+) |
| LOC110494043 | LOC106565114 | coding | upstream | 120387 | 50837015 ~ 50840404 (+) |
| LOC110493204 | NA | coding | upstream | 131592 | 50825463 ~ 50829199 (+) |
| LOC118936400 | NA | coding | upstream | 141739 | 50816422 ~ 50819052 (+) |
| apobec2a | LOC100196684 | coding | downstream | 91581 | 51052682 ~ 51062761 (+) |
| csf1 | csf1 | coding | downstream | 640332 | 51601433 ~ 51640412 (+) |
| LOC110494059 | nfasc | coding | downstream | 1005938 | 51967039 ~ 52121978 (+) |
| LOC110494060 | LOC106565094 | coding | downstream | 1229498 | 52190599 ~ 52273991 (+) |
| LOC110494061 | LOC106565309 | coding | downstream | 1313153 | 52274254 ~ 52280244 (+) |
| G1460215 | NA | non-coding | upstream | 353 | 50960116 ~ 50960438 (+) |
| G1460171 | NA | non-coding | upstream | 10248 | 50946778 ~ 50950543 (+) |
| G1460201 | NA | non-coding | upstream | 19531 | 50940758 ~ 50941260 (+) |
| G1460202 | NA | non-coding | upstream | 27268 | 50931442 ~ 50933523 (+) |
| G1460203 | NA | non-coding | upstream | 29463 | 50930038 ~ 50931328 (+) |
| G1460219 | NA | non-coding | downstream | 11437 | 50972538 ~ 50972851 (+) |
| G1460228 | NA | non-coding | downstream | 28806 | 50989907 ~ 50990506 (+) |
| G1460247 | NA | non-coding | downstream | 65219 | 51026320 ~ 51044188 (+) |
| G1460249 | LOC106565103 | non-coding | downstream | 119031 | 51080132 ~ 51137770 (+) |
| G1460330 | NA | non-coding | downstream | 252361 | 51213462 ~ 51215222 (+) |
| G1459769 | NA | other | upstream | 183719 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 525085 | 50427145 ~ 50437612 (+) |
| LOC110494957 | qrich1 | other | upstream | 777095 | 50181045 ~ 50192699 (+) |
| G1458807 | NA | other | upstream | 1521462 | 49439006 ~ 49439329 (+) |
| G1464092 | LOC106565344 | other | downstream | 3212913 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 3295280 | 54256327 ~ 54264616 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 3510604 | 54471705 ~ 54474472 (+) |
| G1466124 | NA | other | downstream | 5035547 | 55996648 ~ 55998347 (+) |
