G1460219


Basic Information

Item Value
gene id G1460219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50972538 ~ 50972851 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1670612
TTTTAATTAGGCCTACAGTTGCATATGCCTGTGCTATGCAAacatgcataaagcaagctcagccctgtgagttaTATTGTCCATTGGTTGTTGCCTCTGTCTAGATAGAGGAAACCCCCCTGTTAGTCTAGTCTAAATATAATTCATATAAAAGTATCAGGTTGCTGTagtttgacagggttttcatTCTCCCCAGGGCTTGTTGACCAAACCTTGTTGACCAAACCTTTGGTGGCGCTGCTGTAAtggaatgtacagtgcattcggaaagtattctcaCCCCGTGACtattcccacattttgttacgttacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1670612 True 314 lncRNA 0.42 1 50972538 50972851

Neighbor

gene id symbol gene type direction distance location
LOC110494047 btg2 coding upstream 75094 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 111440 50852607 ~ 50861098 (+)
LOC110494043 LOC106565114 coding upstream 132134 50837015 ~ 50840404 (+)
LOC110493204 NA coding upstream 143339 50825463 ~ 50829199 (+)
LOC118936400 NA coding upstream 153486 50816422 ~ 50819052 (+)
apobec2a LOC100196684 coding downstream 79831 51052682 ~ 51062761 (+)
csf1 csf1 coding downstream 628582 51601433 ~ 51640412 (+)
LOC110494059 nfasc coding downstream 994188 51967039 ~ 52121978 (+)
LOC110494060 LOC106565094 coding downstream 1217748 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 1301403 52274254 ~ 52280244 (+)
G1460214 NA non-coding upstream 11437 50960791 ~ 50961101 (+)
G1460215 NA non-coding upstream 12100 50960116 ~ 50960438 (+)
G1460171 NA non-coding upstream 21995 50946778 ~ 50950543 (+)
G1460201 NA non-coding upstream 31278 50940758 ~ 50941260 (+)
G1460202 NA non-coding upstream 39015 50931442 ~ 50933523 (+)
G1460228 NA non-coding downstream 17056 50989907 ~ 50990506 (+)
G1460247 NA non-coding downstream 53469 51026320 ~ 51044188 (+)
G1460249 LOC106565103 non-coding downstream 107281 51080132 ~ 51137770 (+)
G1460330 NA non-coding downstream 240611 51213462 ~ 51215222 (+)
G1460413 NA non-coding downstream 338103 51310954 ~ 51311175 (+)
G1459769 NA other upstream 195466 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 536832 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 788842 50181045 ~ 50192699 (+)
G1458807 NA other upstream 1533209 49439006 ~ 49439329 (+)
G1464092 LOC106565344 other downstream 3201163 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 3283530 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 3498854 54471705 ~ 54474472 (+)
G1466124 NA other downstream 5023797 55996648 ~ 55998347 (+)

Expression


Co-expression Network