Gene
RNA
| Item | Value |
|---|---|
| gene id | G1460413 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 51310954 ~ 51311175 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1670825 | True | 222 | lncRNA | 0.38 | 1 | 51310954 | 51311175 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| apobec2a | LOC100196684 | coding | upstream | 248193 | 51052682 ~ 51062761 (+) |
| LOC110494047 | btg2 | coding | upstream | 413510 | 50894903 ~ 50897444 (+) |
| rbbp5 | LOC106565113 | coding | upstream | 449856 | 50852607 ~ 50861098 (+) |
| LOC110494043 | LOC106565114 | coding | upstream | 470550 | 50837015 ~ 50840404 (+) |
| LOC110493204 | NA | coding | upstream | 481755 | 50825463 ~ 50829199 (+) |
| csf1 | csf1 | coding | downstream | 290258 | 51601433 ~ 51640412 (+) |
| LOC110494059 | nfasc | coding | downstream | 655864 | 51967039 ~ 52121978 (+) |
| LOC110494060 | LOC106565094 | coding | downstream | 879424 | 52190599 ~ 52273991 (+) |
| LOC110494061 | LOC106565309 | coding | downstream | 963079 | 52274254 ~ 52280244 (+) |
| LOC110494062 | LOC106565093 | coding | downstream | 980051 | 52291226 ~ 52298261 (+) |
| G1460330 | NA | non-coding | upstream | 95732 | 51213462 ~ 51215222 (+) |
| G1460249 | LOC106565103 | non-coding | upstream | 173184 | 51080132 ~ 51137770 (+) |
| G1460247 | NA | non-coding | upstream | 266766 | 51026320 ~ 51044188 (+) |
| G1460228 | NA | non-coding | upstream | 320448 | 50989907 ~ 50990506 (+) |
| G1460219 | NA | non-coding | upstream | 338103 | 50972538 ~ 50972851 (+) |
| G1460414 | NA | non-coding | downstream | 243 | 51311418 ~ 51311754 (+) |
| G1460421 | NA | non-coding | downstream | 12025 | 51323200 ~ 51323428 (+) |
| G1460429 | NA | non-coding | downstream | 21553 | 51332728 ~ 51332948 (+) |
| G1460443 | NA | non-coding | downstream | 39846 | 51351021 ~ 51351304 (+) |
| G1460445 | NA | non-coding | downstream | 42805 | 51353980 ~ 51354247 (+) |
| G1459769 | NA | other | upstream | 533882 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 875248 | 50427145 ~ 50437612 (+) |
| LOC110494957 | qrich1 | other | upstream | 1127258 | 50181045 ~ 50192699 (+) |
| G1464092 | LOC106565344 | other | downstream | 2862839 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 2945206 | 54256327 ~ 54264616 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 3160530 | 54471705 ~ 54474472 (+) |
| G1466124 | NA | other | downstream | 4685473 | 55996648 ~ 55998347 (+) |
| G1466131 | NA | other | downstream | 4704402 | 56015577 ~ 56016613 (+) |
