Gene
RNA
| Item | Value |
|---|---|
| gene id | G1460445 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 51353980 ~ 51354247 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1670857 | True | 268 | lncRNA | 0.40 | 1 | 51353980 | 51354247 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| apobec2a | LOC100196684 | coding | upstream | 291219 | 51052682 ~ 51062761 (+) |
| LOC110494047 | btg2 | coding | upstream | 456536 | 50894903 ~ 50897444 (+) |
| rbbp5 | LOC106565113 | coding | upstream | 492882 | 50852607 ~ 50861098 (+) |
| LOC110494043 | LOC106565114 | coding | upstream | 513576 | 50837015 ~ 50840404 (+) |
| LOC110493204 | NA | coding | upstream | 524781 | 50825463 ~ 50829199 (+) |
| csf1 | csf1 | coding | downstream | 247186 | 51601433 ~ 51640412 (+) |
| LOC110494059 | nfasc | coding | downstream | 612792 | 51967039 ~ 52121978 (+) |
| LOC110494060 | LOC106565094 | coding | downstream | 836352 | 52190599 ~ 52273991 (+) |
| LOC110494061 | LOC106565309 | coding | downstream | 920007 | 52274254 ~ 52280244 (+) |
| LOC110494062 | LOC106565093 | coding | downstream | 936979 | 52291226 ~ 52298261 (+) |
| G1460443 | NA | non-coding | upstream | 2676 | 51351021 ~ 51351304 (+) |
| G1460429 | NA | non-coding | upstream | 21032 | 51332728 ~ 51332948 (+) |
| G1460421 | NA | non-coding | upstream | 30552 | 51323200 ~ 51323428 (+) |
| G1460414 | NA | non-coding | upstream | 42226 | 51311418 ~ 51311754 (+) |
| G1460413 | NA | non-coding | upstream | 42805 | 51310954 ~ 51311175 (+) |
| G1460447 | NA | non-coding | downstream | 3417 | 51357664 ~ 51357881 (+) |
| G1460449 | NA | non-coding | downstream | 5854 | 51360101 ~ 51360321 (+) |
| G1460455 | NA | non-coding | downstream | 20260 | 51374507 ~ 51374748 (+) |
| G1460468 | NA | non-coding | downstream | 34136 | 51388383 ~ 51388599 (+) |
| G1460469 | NA | non-coding | downstream | 34578 | 51388825 ~ 51389091 (+) |
| G1460249 | LOC106565103 | other | upstream | 263091 | 51080132 ~ 51137770 (+) |
| G1459769 | NA | other | upstream | 576908 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 918274 | 50427145 ~ 50437612 (+) |
| LOC110494957 | qrich1 | other | upstream | 1170284 | 50181045 ~ 50192699 (+) |
| G1464092 | LOC106565344 | other | downstream | 2819767 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 2902134 | 54256327 ~ 54264616 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 3117458 | 54471705 ~ 54474472 (+) |
| G1466124 | NA | other | downstream | 4642401 | 55996648 ~ 55998347 (+) |
| G1466131 | NA | other | downstream | 4661330 | 56015577 ~ 56016613 (+) |
