G1460447


Basic Information

Item Value
gene id G1460447
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 51357664 ~ 51357881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1670859
ataccacccaatgTGGCGTTGATTCGTGCAAAGTTGatggcaaatgccatatggcaattgccagttgtaacacttcaaaaatccaacagtgcgctccaccggggtttttcatattggaaatgcaacccattaaaaaagtgctttctggaccgtttttcgaaattctttcgattttttttgtcaattacacatgtgtaagaactgtatgaatatacttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1670859 True 218 lncRNA 0.38 1 51357664 51357881

Neighbor

gene id symbol gene type direction distance location
apobec2a LOC100196684 coding upstream 294903 51052682 ~ 51062761 (+)
LOC110494047 btg2 coding upstream 460220 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 496566 50852607 ~ 50861098 (+)
LOC110494043 LOC106565114 coding upstream 517260 50837015 ~ 50840404 (+)
LOC110493204 NA coding upstream 528465 50825463 ~ 50829199 (+)
csf1 csf1 coding downstream 243552 51601433 ~ 51640412 (+)
LOC110494059 nfasc coding downstream 609158 51967039 ~ 52121978 (+)
LOC110494060 LOC106565094 coding downstream 832718 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 916373 52274254 ~ 52280244 (+)
LOC110494062 LOC106565093 coding downstream 933345 52291226 ~ 52298261 (+)
G1460445 NA non-coding upstream 3417 51353980 ~ 51354247 (+)
G1460443 NA non-coding upstream 6360 51351021 ~ 51351304 (+)
G1460429 NA non-coding upstream 24716 51332728 ~ 51332948 (+)
G1460421 NA non-coding upstream 34236 51323200 ~ 51323428 (+)
G1460414 NA non-coding upstream 45910 51311418 ~ 51311754 (+)
G1460449 NA non-coding downstream 2220 51360101 ~ 51360321 (+)
G1460455 NA non-coding downstream 16626 51374507 ~ 51374748 (+)
G1460468 NA non-coding downstream 30502 51388383 ~ 51388599 (+)
G1460469 NA non-coding downstream 30944 51388825 ~ 51389091 (+)
G1460787 NA non-coding downstream 65274 51423155 ~ 51530654 (+)
G1460249 LOC106565103 other upstream 266775 51080132 ~ 51137770 (+)
G1459769 NA other upstream 580592 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 921958 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 1173968 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 2816133 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 2898500 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 3113824 54471705 ~ 54474472 (+)
G1466124 NA other downstream 4638767 55996648 ~ 55998347 (+)
G1466131 NA other downstream 4657696 56015577 ~ 56016613 (+)

Expression


Co-expression Network