G1460468


Basic Information

Item Value
gene id G1460468
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 51388383 ~ 51388599 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1670882
aatctctgccttctttacacagcgaagtcaataaatcagcacaagtaccaatctCTCACGAAAACAACCAAGTCAATGTTATTTTGGCTCTGGGAGTGTATTGTCCACAGGTgaacatgtcatggaaagtcaTAGAAAATGTAAGTATAGAAAGACAGCCTACTGAAGGAAGgtgaacattaaagcaacgcccaaacagggacttgaaccccggacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1670882 True 217 lncRNA 0.42 1 51388383 51388599

Neighbor

gene id symbol gene type direction distance location
apobec2a LOC100196684 coding upstream 325622 51052682 ~ 51062761 (+)
LOC110494047 btg2 coding upstream 490939 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 527285 50852607 ~ 50861098 (+)
LOC110494043 LOC106565114 coding upstream 547979 50837015 ~ 50840404 (+)
LOC110493204 NA coding upstream 559184 50825463 ~ 50829199 (+)
csf1 csf1 coding downstream 212834 51601433 ~ 51640412 (+)
LOC110494059 nfasc coding downstream 578440 51967039 ~ 52121978 (+)
LOC110494060 LOC106565094 coding downstream 802000 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 885655 52274254 ~ 52280244 (+)
LOC110494062 LOC106565093 coding downstream 902627 52291226 ~ 52298261 (+)
G1460455 NA non-coding upstream 13635 51374507 ~ 51374748 (+)
G1460449 NA non-coding upstream 28062 51360101 ~ 51360321 (+)
G1460447 NA non-coding upstream 30502 51357664 ~ 51357881 (+)
G1460445 NA non-coding upstream 34136 51353980 ~ 51354247 (+)
G1460443 NA non-coding upstream 37079 51351021 ~ 51351304 (+)
G1460469 NA non-coding downstream 226 51388825 ~ 51389091 (+)
G1460787 NA non-coding downstream 34556 51423155 ~ 51530654 (+)
G1460798 NA non-coding downstream 48791 51437390 ~ 51438210 (+)
G1460981 NA non-coding downstream 179617 51568216 ~ 51568432 (+)
G1460997 NA non-coding downstream 187171 51575770 ~ 51576052 (+)
G1460249 LOC106565103 other upstream 297494 51080132 ~ 51137770 (+)
G1459769 NA other upstream 611311 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 952677 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 1204687 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 2785415 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 2867782 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 3083106 54471705 ~ 54474472 (+)
G1466124 NA other downstream 4608049 55996648 ~ 55998347 (+)
G1466131 NA other downstream 4626978 56015577 ~ 56016613 (+)

Expression


Co-expression Network