G1460997


Basic Information

Item Value
gene id G1460997
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 51575770 ~ 51576052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1671440
aggtctacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggacaggtgtcttttatactgataacaagttcaaacaggtgccattaaaacaggtaacgagtggaggacagaggagcctcttaaagaagaagttacaggtctgtgagagccagaaatcttgcttgtttgtaggtgaccaaatacttattttccaccataatttgcaaataaattcattaaaaatcctacaatgtgat

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1671440 True 283 lncRNA 0.39 1 51575770 51576052

Neighbor

gene id symbol gene type direction distance location
apobec2a LOC100196684 coding upstream 513009 51052682 ~ 51062761 (+)
LOC110494047 btg2 coding upstream 678326 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 714672 50852607 ~ 50861098 (+)
LOC110494043 LOC106565114 coding upstream 735366 50837015 ~ 50840404 (+)
LOC110493204 NA coding upstream 746571 50825463 ~ 50829199 (+)
csf1 csf1 coding downstream 25381 51601433 ~ 51640412 (+)
LOC110494059 nfasc coding downstream 390987 51967039 ~ 52121978 (+)
LOC110494060 LOC106565094 coding downstream 614547 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 698202 52274254 ~ 52280244 (+)
LOC110494062 LOC106565093 coding downstream 715174 52291226 ~ 52298261 (+)
G1460981 NA non-coding upstream 7338 51568216 ~ 51568432 (+)
G1460787 NA non-coding upstream 45116 51423155 ~ 51530654 (+)
G1460798 NA non-coding upstream 137560 51437390 ~ 51438210 (+)
G1460469 NA non-coding upstream 186679 51388825 ~ 51389091 (+)
G1460468 NA non-coding upstream 187171 51388383 ~ 51388599 (+)
G1461036 NA non-coding downstream 86004 51662056 ~ 51664073 (+)
G1461060 NA non-coding downstream 128339 51704391 ~ 51707336 (+)
G1461150 LOC106565097 non-coding downstream 298316 51874368 ~ 51876383 (+)
G1461152 NA non-coding downstream 308185 51884237 ~ 51888844 (+)
G1460249 LOC106565103 other upstream 484881 51080132 ~ 51137770 (+)
G1459769 NA other upstream 798698 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 1140064 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 1392074 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 2597962 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 2680329 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 2895653 54471705 ~ 54474472 (+)
G1466124 NA other downstream 4420596 55996648 ~ 55998347 (+)
G1466131 NA other downstream 4439525 56015577 ~ 56016613 (+)

Expression


Co-expression Network