G1461521


Basic Information

Item Value
gene id G1461521
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 51746916 ~ 51761022 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1672019
TGCCCAGTGTTGATTGTACAGGGAGGAGGTGTGAGCGTGAGACAGTATGAGTCATGAGGATGGAGCAGAGCAGCCAGAGGTTTCCAGAGACCTTTAGTCTTCCAGGTATTTACAGTGTGGACTGGAACTGGAAGTGATGCGTAGGTCTACAAAATGCTGTTCGTGGTTATGGTGTTATAACACTGAAGTTTCAGGATCTGCCGATCCCTGTTGAAACATTGTCAACCAAGTACatgctttttttaaatgttgaagACCTTTTTGTGCTTTTTTGTTTCGTTGTGGTTCGTATTGTAATGATTCAGGGAAGTGACTCTCATTATTAGCTAGGTATTCGGGGTTAGATAGTAGACAGTACGTGGGgttattaatatactgtatggcACAATGTTTAAGTATAGGAGAGTGTGAGGCCAGGTATGCAGGTCTAAGTGCTgtgtaggagacagacagacagtacaggtATGTCATGGTGTTTGAGTGTTCTCAGTACTAATACAGGGTGGTGATCTGGTCTGATTTTGTTCTGGCTGTTGTTAGCGGAGGGAGGCGAGATTTTGTTTCTGGGCTGGCCCCTTTCGTCTTGTCTGGTGGGGCCCCTCTGggctgaggaggggaggagacgggacAGGATGGAAGTCGAGTTTGAGCACGCACCTGGAGCCTCGGGCTGGGATTCCTGTAGAACTCCTTCTTTATGACACCTGTCATTTCAAAAAGAgaccaatgagagagagagagggtgcgggggagaggggagaggggagtggagactCTAAACTACATTTTCACCTTTGATTATAAGATTAAGTTCCAGAGGTGGACTGCTTTGACTTTACTTTTCACTACCGACACACTTTCTTTTTCATGAAGGCATGAATGCTTCATTAAATGCTTAATGGAAATTGTATAAGCTCTAACACTTTGGATATGAGCCAGGACTGCAAGGACTGTTGTTTTGCTGTGAGCTCCAAACCGAAAGGGCAGCCTGGGTCTGTTGTTCCAACTTGACCGTACCTGCAGGTTCACTAAGTACAGGCTGAGGTAACAGACACAGAGGTGTAGTTGGAACCTGGAATAGACCTTATTTATGATCGGGGTCACCCAGCCATTacaacactatctacagtatattggCTCATCCCTATCTGACCACACTTGGTTCAACCCTGCATGGTTTAGACTTGTAAAAGGCTATAATGTCTAACAGACACCTCTCAGCTCACAGCATTTTTCAAAGCAGCCTTTTCCCTCCCATGAATTGAAGTAAATTATTAAACGAGAACACTTGgctgaggtgtggtgtggtgtgtgtgtacggtgtgtatGCCTGGTTAACTAGTGTcttaagactgagttacagctagatgtgtatttgtatttgtgtgtgtgatttttcTTGAGCTTCTTATGTGAAGgttgtataatatacagtacttgCTCTATCTTGTTGCCACCAGTGAGGCTGCATTGcgttctcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagaccataCGTGCACATCCTCAGGGAGTGCACTAGTTATTCAACCCCGTGGTGAGAGTAAATCTCATGGTCCATACCACCTTCACTCAGAGGGGTGTCACCTGAGTGTGAGATATTCCCATGTCAAATATTCTCACAGATTATGCATTCTGCCATGGAAGTGCTAACGTGTCTATGTGTtatgggagcgagagagagacacacacaatctctcagTCAATCTcttataatatttataatgccttcagaaagtattcacacatttttaatatttccacattttgttgtgttacagcctgaatttaaaatatatttttttgtgtcactgatctacacagaatatcccataatgtcaaagtggatttttGTTGGTTgaatttttttaacaaattaatacaaaatgtcAAGCTTgatgtcaataagtattcaacccctttgttaaggcaagcctaaattattttggaagtaaaaatgtgctgatcaattcacataataagttgcatggacccaTTAAGTATTCAATAGTAGTGGTTATCATGCTTTTTGactgactaccccatctctgtgccccacatatgtttggggtaaattcaatacaacacatcactgaataccactcttcatattttcaagcatggaggtggctgcatcatattatgggtatgcttgtcatcggcaagaactAGGGAGTTTCTTAGGATGAAAAGAAACGGAATACAGCTATACGCAAAGGCAcaattctagaggaaaacctggttcagtctgctttccaaaagATACTGGcaaacaaattcacctttcagcaggacaatagcctaaaacacaaggcaaactctacactggagttacttaccaagatgacattaaaTGCTCCTTAGTGGCCAAGTCAccattttgacttaaatctgcttgagaatcaatggcaagacttgaaaatggctgtctagccatgaacaacaatcaacttgacagagcttgaagaattttgaaaataataatggagaaaaaatgtacaatccaggtttgcaaagcACTTAGACTTACTCAcggctgtaatcactgacaaaggtgcgtctgcaaagtattgactcaggggtgtgaatacttatgtaaatgcgatatttctgtatttcatttttaataaattataTGTATATTCCCCTTTCTCTAATCACTATTACTATTATTTATTTGTGACTTTTATTGTTGATTTTATTATCTCAGTGGCCTTGTCATTTTACTAAAGCTTGAGTgcgagtgagagcgagagagagcgagagagagagagagagagagacagacctgtGTCGAAGTGAGGTCTGTTTAGCTTACCTTGTCAAAGTGATCAGGTCAAGATACAGTAGAGGCTATCTGGTGTAGCTGTATCAGCTGCTGTCATGTGCAACATCCCTATTGTATTAGCTGCTGTTTCATTGGGTTCAGTCAGCCATGGCCAGGCAATGAGAACACTGATAGAATATTGATGAAGGGTTCTTACATAAGTTTAGTGCAGCAGCACTGTATCAGTCTGACGGTTCTCTCTCTGCTACTCTGTTAGAACTACCCCGCCTCTGAGATACCCACCATCATCAAACCAGGGAGAACaacgtgtttgtttgtgtgtgtgtgtgtgtctgtagtgtgccCAGACCCAGATTCATATGCGTACACAaacaactagggttgcaaaaaGCCCTCAAATAATCACAGTGTAATCAGTATACAGCCCTCAACCAGGCAGATTGCTCAAGATTGACTTCTTAATTGGACGTCTGCCCTTGTCTTGAGGACATCGGGAAATGCCTACAAATCCGGCCActgggggcaacagtgagcgctattaccatcaagtaggcttgggtttttCTATGGCGTTGTGCACGGGGGTGACGGATGTGCGTAATCCCATCACTCCGGATCAGAAGGTCGCCTGTTAAATCCCAGTGTTCGTAATCCCAGTGTGTGTAACCCCATCACTCCGGATATGAAAGTTGAGTGTCCAATCCAGTGGTAGAcacttgtttatttttattttgttttaaccctatcccaaacctttacctttaccttaaccattcagaatgaatgcctaaattctacgttttaaccctatccaaaaccttaGCATGATAGCACATACCGATAGGATCCAGTCCAGgcactaatgctagttagcattggctttcaaaactacctctaacttccttcattcTGGACAGAGAGGCGTACAAATGGTAACCACAAGTTGATGTGACGCTGAGGAAGTAGATtttgccaaaatcctgaaataTCCCTTTAACTTCAAAATGTGATGTTCAGAgcaacttcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcacacacacacattctcccaCCAGCCCAGAACAGATATTGTGCTTTCACAGTGTTAAGGTATCCAGTGGGATGGTGCTGTGCTGTTGTCATCAGCAGGTTTAGATAGGTTCATGTAGTCTTTTTATTCTGTGTTCTCTGGGGTGAGAGGGGTCATTCCCAGCCCAGGACATACTCTAGATACGCCAGACGTACACAacccgttcaaatgtttggggtcacttagaaatatccttgtttttgaaagaaaagcacattgtcacgccctgaacttagagctttttatgtctctattttggtttggtcagggtgtgacttgggtgggcattctatgttcctttttttatgtttttgtatttctttgttttggccaggtatggttctcaatcagggacagctgtctatcgttggctctgattgagaaccatacataggtagctttttcccacagggtttttgtgggtagttaatttctgtttagtgttttgcaccttacagggctgtttcggttattctctttgttatttttgttagaGTGTTCAGTTTGAAAGAAagtaacatgaacacttaccacgctgcgctttggtccgatgattcTTCttcagacgacgaataccgttacacacatttttttgtctattaaaataacatcaaattgatcagaaatacagtgtagacattgttaatgttgttaaggactattgtagctggaaacggcagattttttatggaatgtctatgtaggcgtacagaggcccattatcagcaaccatcactcctgtgttccaatggcaccttgtgttagctaatccaagtttatcattttaaaaggccaattgaccattagaaaacccttctgcaattatggtagcacagctgaaaactgttgttctgattaaagacgcaatgaaactggccttcttttgactagttgagtatctggggcATCAgctttgtgggttcgattacaagctcagaatgtccagaaacaaagtaatttcttctgaaacttgtcagtctattcttgttctgagaaatgaaggctattccatgtgagaaattgccaagaaactgaagatctcgtacaaagctgtgtactactcccttcactgaacagcgcaaactggctctaaccagaatagaatgaGGAGTGGGTGGCCCCGGagcacaattgagcaagaggacaagtacattagagtgtctagtttgagaaacagacacctcacaagtcctcaactggcagcttcattaaatagtgcccgcaaaacaccagtctcaacgtcaacagtgaagagatgactctgggatgctggctttctagtcagagttgcaaagaaaagccatacagtatctcagactggccaataaatagAACATATTAAGAtgtgcaaaagaacacagacactggacagaggaactctgcctagaaggccagcatcccggagccacctcttcactgttgacgttgagactgctcagttgtgcaccgaagcctcccactcctttttctattctgtttagagactccgtttccagctacaatagcaatttacaacattaataatgtatttctgatcaattttatgctATTTCAATGGACAAgaaaatatgcttttctttcaaaaacagggaTATTTCgaaaccccaaacttttgaacggtagtgtaggtatGCAGGGTATGAATATGGTGAACATTCATTCATATAGAGATATGCAGGGCATTCATATGGAGCATCCAGTGTTGCAGCAGGCAGGGGTGTAGACATCCGGAGTGTTTTGTATTACAGCGGGACatagacatCAGGAATATATGTTGTAGAGAGAGCCCATGTTGTATAAATCTAGAGAGCTGTGCATTGTAGCGGGACTTCGATATAATATGTAGGATCATGTGTTGTAGTCCCTTATGTAAAAAACATGAATTTCACGTGATCtcatgtgaagttaatgtgataatatgacaacatgtaaagcaacatgtgataacatgaaactacacacGTGAAAACATGACATTTCTACTCATTTGAAATATTGTGATTTTCCACATGAAATCCTGTGGTTTTTCTGTAAGGGATATGCTTGGCCTGGCTCTCTATTTTTCTACCTCCCTTGTTGCAGTCCCATACTCCCTTTCCCACCAGCCTGCCCAACCTCTGATTGTATCTGCTTGTAAAGTACATTTGAAtggttgtatttttttgtgtgtctttCCTCCCTTCGAGTCCCACACTCCCCTATCaccattcttcctctctctctccctctccccatgccaccctctcactctctctctctatttctctctctccatctccgcCTCCCTTCATCATCTGCCCTCTTCCCAGCTTGGTGTGGTTTCCCAGGGTCAGGGTTGTAAGGGTTGTTTATTGTGTTACCTTGTACTCAGCCTGGGAGCAACACGTGTGTTCtatctgtgtctgtttgtctgtttgtagGTCTGCTTGTCTGTCTACCTTGGATGCtctccaagacacacacacacacacacacactttggtacAGTGCAGGGAAGTTACAAGTTACACTATTACAAATCATCCCAGCTCATGTCTTGGTAATGACAGCCATTAGCTATactgtctgagtggtgggatGACTGTCTGTGACTCGTTTACTGCTTGCCATAACCACGGCAAGTAGAGGTGCTGGGGGTGCTGCACTACCCCCTGAATTTTTTAAAacaataataaaaatacaaaaatcacAAAAGTAATGCACTTGGCATTTACTACTATTAGCGGGAAGAATGAATGAAAGGTTTGTTGTGAGTTTTTGCCCTGTCCCTTTCTTTGTGATTGTCATTGTAATGGTatctagaaagaacaaaacctTGTCCTCAAGCATTTACATCAAAAGGTGCAAAGTTATGGGCAAAGACACCTAACATCcacataaaataaaatatttttcgTAATAAAATAACATGGACTGCAACCACTGTTTGTGTAGTATTAATGTACGATCCTTACAAACCACTTCATGTAAatgtacattactgtattgtacatagGCTGGTCATCTAGGTTTGTACCTGTATACTTTCCATCACCATGAAGAAGAACAATGGACAATACAGTAATTGAGCACCCCCATCCCCAAACGACTTCCCACGGCTATGCTGCTTGCTCTGTgatagccagacagacagacacacaggagggagagagagagactatcagcaacagcagactccaacactcagtgaaaacaatgtcttGAGCAAACCTTAAAAATGTGCTTTCTACCAAAATACcttacgacagaccacgtatacACTGTACACACCCTTATTGGCAACCAAACcaaccaaaacaaaaacaaagtattctcatcaaatcaaatcaaactttatttgtcacaagcACCGAATACAATAAGTGTAGAcacaacagtgcagttcaagaagagttaagaaaatatttaccaagtagactaaaataaaaagtaataatacagaataacacaataagaataacaataatgaggctatatacaggggccaccggtaccaagtcagtgtgctggggtacaggttagtttgtacatgtaggtgggggtgaagtgactatgcatagataataaacagcgagtagcagcagtgtacaaaagagaggggggtgtcaatgtaaatagtgcGGTGgcaattttattaattgttcagcagtcttatggcttatggtagaagctgttgaggagccttttggtcctagacttgactctccggtatcgcttgccgtgcggtagcagagaaaacagtctatgacatgggtgactggagtctgtgaCAGTTTTATGGGCTTTCCTATTGTATAGTtcctggatgacagggagcttggccccattgatgtactgggcagttcgcactaccctctgtagcaccttatggtcagatgccgagcagttgccgtaccaggcggtgatgcaaccggtcaggacgctctcgagaaacttttgaggatctgaggacccgtgccaaatctcttcagtctccgtatggggaaaaggttttgtaATGCCCTCTTCATGAATGTCTTGgaatgtttggaccatgatagttcgttggaaactctggacccgctccactacagcccggtcGATGTCAATgcgggcctgttcggcccgccttttcctgtagtccacaatcagctcctttgttttgctcaccttgagagagaggttgctgtcctggcaccacactgccagttctctgacctcctcccaataggcCGTTTCATCGTcactgatcaggcctaccactattgtgttgTCAACAaaatgaatgatggtgttggagtcgtgtttggccacgcagtcgtgggtgaacagggaatacaggaggggactaagtacacacccctgaggggccccagtgttaaggatcagcgtggcagacatgttgttgtctactcttaccacctgggggcagcccatcaggaagttcaggatccagttgcagagagaggtgtttagtcccagagtccttagcttagtgatgagcattttgggcactatggtgttgaatgctgagctgtagtcaatgaacagcattctcacataggtgttccttttgtctaagTGGGAaattgtggagtgcaattgagattgagtcttctgtggatctgtttgggtggtatgcgaattggagtggttctagggtgtccgggaggatgctgttgatttgagccatggccagccattcaaaacacttcatggctaccgacattctgtggtggtaaatagatggctgcaaataatatagatgagaactcgcttggtagatagtgtggtctacagctaatcataaggtactctacctcaggcaagcaatacctcgagacttctttaatattatacattgcgcaccagctgttattgacaaatagacacacccacccaccccttgtcttaccagaggtagcatcTCTGTTCTGCCGGGACATGGAAAATCCCGTTAGCTCTATATTGTCTTTATCGTCGTTCAGCTAcgtctcagtgaaacataagatgtcccgttggtaggagaATTTTAATTGTAggtcatccattttattttccaatgattgcacgttagcaagaagaacggatggcagtgggagtttacttgcTCACCTACAGATTCTCAAAAGGCTGCCTGATCTGTGGCCCCTTTTCCTGCATTTTTCTTCACgcaaaggcgtggatctgggcctgttccattGAAAGAGGATATCCTTCTCATCGGACTCGTTGAAGGAAAAAGTTTATTCCAGGTCACGGTgaataatcgctgttctgatgtccagaagttactTTCGGTTATAAGTGAtgatagcagcaacattatgtacacaataagttaaaaaaataagttacacaaaacgCCCCCAAAAATAACCAAATAGCAACAATTgtttgggagaatgtaaaacgttAGCCATGTCGTCGGCGCCATTATGTTCATGCTTTGTTGAATAAAAAATATAGAAATTACTTCCACAAGGCTGTGAATGATTTGGGAGACAAgtcaagaagggccttctactctttcaaaaggaacataaaacttgacatcccaattagaatcttgctaaaaatacttcaatcagttatagaacccattgccctctatggttgtgaggtctggggtccactaatcactaatcactaatcaataatttacaaaatgggacaaacccTATTGAGACtgtgcatgcagaattctgtaaaaatatactttatactatactttctagttatcaaaatccagaaaatagctgtTAACTTCCTGTTAGGTGGTTGTAGTATTTATGCTTACACATTCCATCACAAAGCCTTCgtctacagagagattaacctagagaagactcccctcagccagctggttctgaggcacactgcccacaaaatgaggtggaaactgagctgcacttcttaaCCATCTGCCAAATGTATGAACACCTTAGAGATgcatatttcccacagatcacacaaacccacaaagaatttgaaaacaaatcaaacattgataaactcccatatctgttcgacaaaataccacagtgtgcaagcacagcagcaagatatgtggtccgttgccatgagaaaagggcaaccagaaCAAACAACATAATGTAAATACCACCAATATTTATCTGTTAATGTATTTTCCCTTACtattcgagagagagagagagagagagagagagagagaaagagagagagagagcgagagagagaaggggctgtCCCATTGTCTCAGAGAGAGTATGAGCTGTAGATGCCCAGAGCAGAGCATAACAGGAAGCGTATCTGTAAGATGGTAGGTAGTCTACCTCTTCCTGACATGGAAGAGACTCagtgacatagagagagagagaagtgtcgCCAATGTACCCCAGGGCATGTTTGACTAGTCAAGCACACTGTGTACTGTATCCCTACATCCGTGGCCTtggtgtttacacacacacacacacacttacgaacttatggacacacacacacacacacacacacaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1672019 True 10468 TUCP 0.43 9 51746916 51761022
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110494056 got1a coding downstream 79915 51663617 ~ 51667001 (-)
optc LOC106565102 coding downstream 279616 51437399 ~ 51467300 (-)
LOC110493206 LOC106565103 coding downstream 504044 51080114 ~ 51242872 (-)
LOC110494054 LOC106565105 coding downstream 669571 51063244 ~ 51077345 (-)
elf3 LOC106565106 coding downstream 715329 51026318 ~ 51031587 (-)
LOC110494057 LOC106565097 coding upstream 113278 51874300 ~ 51882293 (-)
pik3c2b LOC106565096 coding upstream 123179 51884201 ~ 51953114 (-)
LOC110494065 LOC106565089 coding upstream 606604 52367626 ~ 52369842 (-)
LOC110494069 LOC106565086 coding upstream 658732 52419754 ~ 52424083 (-)
LOC110494074 rrp9 coding upstream 947946 52708968 ~ 52715179 (-)
G1461510 NA non-coding downstream 13972 51676820 ~ 51732944 (-)
G1461489 NA non-coding downstream 96363 51650331 ~ 51650553 (-)
G1461458 NA non-coding downstream 98650 51597176 ~ 51648266 (-)
G1461457 NA non-coding downstream 104853 51606190 ~ 51642063 (-)
G1460963 NA non-coding downstream 190698 51555945 ~ 51556218 (-)
G1461579 NA non-coding upstream 65100 51826122 ~ 51843045 (-)
G1461582 NA non-coding upstream 70386 51831408 ~ 51832123 (-)
G1461630 NA non-coding upstream 178146 51939168 ~ 51939405 (-)
G1461719 NA non-coding upstream 305785 52066807 ~ 52071782 (-)
G1461732 nfasc non-coding upstream 321856 52082878 ~ 52083364 (-)
G1460539 NA other downstream 747512 50998754 ~ 50999404 (-)
LOC110494046 LOC106565111 other downstream 871438 50862652 ~ 50875481 (-)
G1460128 NA other downstream 985920 50754934 ~ 50760996 (-)
slc25a34 LOC106565132 other downstream 1392166 50349819 ~ 50363084 (-)
G1462356 NA other upstream 943111 52704133 ~ 52704688 (-)
G1463760 NA other upstream 2017460 53778482 ~ 53780496 (-)
G1464551 NA other upstream 2701649 54462671 ~ 54463702 (-)
G1464933 NA other upstream 2911230 54672252 ~ 54673919 (-)
G1464950 ccdc36 other upstream 2955082 54716104 ~ 54717490 (-)

Expression

G1461521 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
End of interactive chart.

G1461521 Expression in each Bioproject

Bar chart with 21 bars.
G1461521 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
End of interactive chart.

Co-expression Network